Structural basis for prereceptor modulation of plant hormones by GH3 proteins

Science. 2012 Jun 29;336(6089):1708-11. doi: 10.1126/science.1221863. Epub 2012 May 24.

Abstract

Acyl acid amido synthetases of the GH3 family act as critical prereceptor modulators of plant hormone action; however, the molecular basis for their hormone selectivity is unclear. Here, we report the crystal structures of benzoate-specific Arabidopsis thaliana AtGH3.12/PBS3 and jasmonic acid-specific AtGH3.11/JAR1. These structures, combined with biochemical analysis, define features for the conjugation of amino acids to diverse acyl acid substrates and highlight the importance of conformational changes in the carboxyl-terminal domain for catalysis. We also identify residues forming the acyl acid binding site across the GH3 family and residues critical for amino acid recognition. Our results demonstrate how a highly adaptable three-dimensional scaffold is used for the evolution of promiscuous activity across an enzyme family for modulation of plant signaling molecules.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Amino Acid Sequence
  • Amino Acids / chemistry
  • Amino Acids / metabolism
  • Arabidopsis
  • Arabidopsis Proteins / chemistry*
  • Arabidopsis Proteins / metabolism
  • Benzoates / chemistry
  • Binding Sites
  • Crystallography, X-Ray
  • Cyclopentanes / chemistry
  • Indoleacetic Acids / chemistry
  • Indoleacetic Acids / metabolism
  • Models, Molecular
  • Molecular Sequence Data
  • Nucleotidyltransferases / chemistry*
  • Nucleotidyltransferases / metabolism
  • Oxylipins / chemistry
  • Plant Growth Regulators / chemistry
  • Plant Growth Regulators / metabolism
  • Protein Structure, Tertiary
  • Structure-Activity Relationship
  • Substrate Specificity

Substances

  • Amino Acids
  • Arabidopsis Proteins
  • Benzoates
  • Cyclopentanes
  • Indoleacetic Acids
  • Oxylipins
  • PBS3 protein, Arabidopsis
  • Plant Growth Regulators
  • jasmonic acid
  • JAR1 protein, Arabidopsis
  • Nucleotidyltransferases