Microsatellite markers for characterization of native and introduced populations of Plasmopara viticola, the causal agent of grapevine downy mildew

Appl Environ Microbiol. 2012 Sep;78(17):6337-40. doi: 10.1128/AEM.01255-12. Epub 2012 Jun 15.

Abstract

We reported 31 microsatellite markers that have been developed from microsatellite-enriched and direct shotgun pyrosequencing libraries of Plasmopara viticola, the causal agent of grapevine downy mildew. These markers were optimized for population genetics applications and used to characterize 96 P. viticola isolates from three European and three North American populations.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • DNA, Fungal / chemistry
  • DNA, Fungal / genetics
  • Europe
  • Microsatellite Repeats*
  • Molecular Sequence Data
  • Molecular Typing / methods*
  • Mycological Typing Techniques / methods*
  • North America
  • Oomycetes / classification*
  • Oomycetes / genetics*
  • Oomycetes / isolation & purification
  • Plant Diseases / microbiology*
  • Sequence Analysis, DNA
  • Vitis / microbiology*

Substances

  • DNA, Fungal

Associated data

  • GENBANK/JQ219972
  • GENBANK/JQ219973
  • GENBANK/JQ219974
  • GENBANK/JQ219975
  • GENBANK/JQ219976
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  • GENBANK/JQ219990
  • GENBANK/JQ219991
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  • GENBANK/JQ219996
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  • GENBANK/JQ220000
  • GENBANK/JQ220001
  • GENBANK/JQ220002
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  • GENBANK/JQ220004
  • GENBANK/JQ220005
  • GENBANK/JQ220006