This site needs JavaScript to work properly. Please enable it to take advantage of the complete set of features!

Skip to main page content

Email citation

Add to Collections

Your saved search

Name of saved search:

Search terms:

Test search terms

Would you like email updates of new search results?

Yes
No

Email: (change)

Frequency:

Which day?

Which day?

Report format:

Send at most:

Send even when there aren't any new results

Optional text in email:

Your RSS Feed

. 2012 Jul 30;9(8):772-3.

doi: 10.1038/nmeth.2111.

CircadiOmics: integrating circadian genomics, transcriptomics, proteomics and metabolomics

Vishal R Patel, Kristin Eckel-Mahan, Paolo Sassone-Corsi, Pierre Baldi

PMID: 22847108
DOI: 10.1038/nmeth.2111

CircadiOmics: integrating circadian genomics, transcriptomics, proteomics and metabolomics

Vishal R Patel et al. Nat Methods. 2012.

. 2012 Jul 30;9(8):772-3.

doi: 10.1038/nmeth.2111.

Authors

Vishal R Patel, Kristin Eckel-Mahan, Paolo Sassone-Corsi, Pierre Baldi

PMID: 22847108
DOI: 10.1038/nmeth.2111

No abstract available

PubMed Disclaimer

Similar articles

CircadiOmics: circadian omic web portal.
Samad M, Agostinelli F, Sato T, Shimaji K, Baldi P. Samad M, et al. Nucleic Acids Res. 2022 Jul 5;50(W1):W183-W190. doi: 10.1093/nar/gkac419. Nucleic Acids Res. 2022. PMID: 35657089 Free PMC article.
CircadiOmics: circadian omic web portal.
Ceglia N, Liu Y, Chen S, Agostinelli F, Eckel-Mahan K, Sassone-Corsi P, Baldi P. Ceglia N, et al. Nucleic Acids Res. 2018 Jul 2;46(W1):W157-W162. doi: 10.1093/nar/gky441. Nucleic Acids Res. 2018. PMID: 29912458 Free PMC article.
The SCN Clock Governs Circadian Transcription Rhythms in Murine Epididymal White Adipose Tissue.
Kolbe I, Husse J, Salinas G, Lingner T, Astiz M, Oster H. Kolbe I, et al. J Biol Rhythms. 2016 Dec;31(6):577-587. doi: 10.1177/0748730416666170. Epub 2016 Sep 21. J Biol Rhythms. 2016. PMID: 27650461
[The roles of clock genes in obesity].
Shimba S. Shimba S. Nihon Rinsho. 2013 Feb;71(2):244-8. Nihon Rinsho. 2013. PMID: 23631200 Review. Japanese.
Circadian rhythms and proteomics: It's all about posttranslational modifications!
Mauvoisin D. Mauvoisin D. Wiley Interdiscip Rev Syst Biol Med. 2019 Sep;11(5):e1450. doi: 10.1002/wsbm.1450. Epub 2019 Apr 29. Wiley Interdiscip Rev Syst Biol Med. 2019. PMID: 31034157 Review.

See all similar articles

Cited by

Time is ripe: maturation of metabolomics in chronobiology.
Rhoades SD, Sengupta A, Weljie AM. Rhoades SD, et al. Curr Opin Biotechnol. 2017 Feb;43:70-76. doi: 10.1016/j.copbio.2016.09.007. Epub 2016 Oct 1. Curr Opin Biotechnol. 2017. PMID: 27701007 Free PMC article. Review.
What time is it? Deep learning approaches for circadian rhythms.
Agostinelli F, Ceglia N, Shahbaba B, Sassone-Corsi P, Baldi P. Agostinelli F, et al. Bioinformatics. 2016 Jun 15;32(12):i8-i17. doi: 10.1093/bioinformatics/btw243. Bioinformatics. 2016. PMID: 27307647 Free PMC article.
RhythmicDB: A Database of Predicted Multi-Frequency Rhythmic Transcripts.
Castellana S, Biagini T, Petrizzelli F, Cabibbo A, Mazzoccoli G, Mazza T. Castellana S, et al. Front Genet. 2022 Jun 14;13:882044. doi: 10.3389/fgene.2022.882044. eCollection 2022. Front Genet. 2022. PMID: 35774515 Free PMC article.
Evidence for a role of human blood-borne factors in mediating age-associated changes in molecular circadian rhythms.
Schwarz JE, Mrčela A, Lahens NF, Li Y, Hsu CT, Grant G, Skarke C, Zhang SL, Sehgal A. Schwarz JE, et al. bioRxiv [Preprint]. 2024 Jul 1:2023.04.19.537477. doi: 10.1101/2023.04.19.537477. bioRxiv. 2024. Update in: Elife. 2024 Nov 01;12:RP88322. doi: 10.7554/eLife.88322 PMID: 37808824 Free PMC article. Updated. Preprint.
Partitioning circadian transcription by SIRT6 leads to segregated control of cellular metabolism.
Masri S, Rigor P, Cervantes M, Ceglia N, Sebastian C, Xiao C, Roqueta-Rivera M, Deng C, Osborne TF, Mostoslavsky R, Baldi P, Sassone-Corsi P. Masri S, et al. Cell. 2014 Jul 31;158(3):659-72. doi: 10.1016/j.cell.2014.06.050. Cell. 2014. PMID: 25083875 Free PMC article.

See all "Cited by" articles

References

1. Bioinformatics. 2009 Jan 15;25(2):167-74 - PubMed
1. Nat Struct Mol Biol. 2009 May;16(5):462-7 - PubMed
1. PLoS Genet. 2009 Apr;5(4):e1000442 - PubMed
1. Nucleic Acids Res. 2000 Jan 1;28(1):27-30 - PubMed
1. Proc Natl Acad Sci U S A. 2012 Apr 3;109(14):5541-6 - PubMed

Publication types

Actions
Actions
Actions
Actions

MeSH terms

Actions
Actions
Actions
Actions
Actions
Actions
Actions
Actions
Actions
Actions
Actions
Actions
Actions
Actions
Actions
Actions

Substances

Actions
Actions

Grants and funding

LinkOut - more resources

Full Text Sources
- Nature Publishing Group
Other Literature Sources
- The Lens - Patent Citations Database