A graphene-based sensor array for high-precision and adaptive target identification with ensemble aptamers

J Am Chem Soc. 2012 Aug 22;134(33):13843-9. doi: 10.1021/ja305814u. Epub 2012 Aug 10.

Abstract

In this work, we report a new concept of adaptive "ensemble aptamers" (ENSaptamers) that exploits the collective recognition abilities of a small set of rationally designed, nonspecific DNA sequences to identify molecular or cellular targets discriminatively. In contrast to in vitro-selected aptamers, which possess specific "lock-and-key" recognition, ENSaptamers rely on pattern recognition that mimics natural olfactory or gustatory systems. Nanographene oxide was employed to provide a low-background and highly reproducible fluorescent assay system. We demonstrate that this platform provides a highly discriminative and adaptive tool for high-precision identification of a wide range of targets for diagnostic and proteomic applications with a nearly unlimited supply of ENSaptamer receptors.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Aptamers, Nucleotide / chemistry*
  • Bacteria / isolation & purification
  • Base Sequence
  • Biosensing Techniques / methods
  • Blood Proteins / analysis
  • Cell Line
  • Cell Line, Tumor
  • Fluorescent Dyes / chemistry*
  • Graphite / chemistry*
  • Humans
  • Nanostructures / chemistry*
  • Proteins / analysis*
  • Proteomics / methods
  • Spectrometry, Fluorescence / methods
  • Thermodynamics

Substances

  • Aptamers, Nucleotide
  • Blood Proteins
  • Fluorescent Dyes
  • Proteins
  • Graphite