Rationally-designed fluorescent lysine riboswitch probes

Org Biomol Chem. 2012 Oct 21;10(39):7872-4. doi: 10.1039/c2ob26160j.

Abstract

Two fluorescent lysine amide analogs, in which the carboxyl end of lysine was covalently attached to dansyl or NBD groups through an ethylene glycol-based linker, were rationally designed and synthesized. Both probes showed high binding affinity to the lysine riboswitch in vitro and their fluorescence intensities decreased by riboswitch binding.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amides / chemistry
  • Fluorescent Dyes / chemical synthesis
  • Fluorescent Dyes / chemistry*
  • Lysine / chemistry*
  • Molecular Structure
  • Riboswitch*

Substances

  • Amides
  • Fluorescent Dyes
  • Riboswitch
  • Lysine