Structures of a γ-aminobutyrate (GABA) transaminase from the s-triazine-degrading organism Arthrobacter aurescens TC1 in complex with PLP and with its external aldimine PLP-GABA adduct

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2012 Oct 1;68(Pt 10):1175-80. doi: 10.1107/S1744309112030023. Epub 2012 Sep 29.

Abstract

Two complex structures of the γ-aminobutyrate (GABA) transaminase A1R958 from Arthrobacter aurescens TC1 are presented. The first, determined to a resolution of 2.80 Å, features the internal aldimine formed by reaction between the ℇ-amino group of Lys295 and the cofactor pyridoxal phosphate (PLP); the second, determined to a resolution of 2.75 Å, features the external aldimine adduct formed between PLP and GABA in the first half-reaction. This is the first structure of a microbial GABA transaminase in complex with its natural external aldimine and reveals the molecular determinants of GABA binding in this enzyme.

MeSH terms

  • 4-Aminobutyrate Transaminase / chemistry*
  • 4-Aminobutyrate Transaminase / genetics
  • 4-Aminobutyrate Transaminase / metabolism
  • Arthrobacter / enzymology*
  • Arthrobacter / genetics
  • Models, Molecular
  • Phylogeny
  • Protein Binding
  • Protein Structure, Quaternary
  • Protein Structure, Tertiary
  • Pyridoxal Phosphate / chemistry*
  • Pyridoxal Phosphate / metabolism
  • Structural Homology, Protein

Substances

  • Pyridoxal Phosphate
  • 4-Aminobutyrate Transaminase

Associated data

  • PDB/4ATP
  • PDB/4ATQ