Kinetic template-guided tethering of fragments

ChemMedChem. 2012 Dec;7(12):2082-6. doi: 10.1002/cmdc.201200404. Epub 2012 Oct 2.

Abstract

Birds of a tether: A tethering strategy for the site-directed discovery of low-molecular-weight fragments that bind weakly to defined protein surfaces is described. A solvent-exposed protein thiol captures acrylamide-modified fragments in a conjugate addition reaction that requires a template to produce a measureable quantity of protein-fragment adduct, which can be rapidly identified by mass spectrometry.

MeSH terms

  • Acrylamides / chemistry
  • Acrylamides / metabolism*
  • Binding Sites
  • Drug Discovery / methods*
  • Glutathione / chemistry
  • Glutathione / metabolism
  • Kinetics
  • Ligands
  • Mass Spectrometry
  • Sulfhydryl Compounds / chemistry
  • Sulfhydryl Compounds / metabolism*
  • Thymidylate Synthase / antagonists & inhibitors*
  • Thymidylate Synthase / chemistry
  • Thymidylate Synthase / metabolism*

Substances

  • Acrylamides
  • Ligands
  • Sulfhydryl Compounds
  • Thymidylate Synthase
  • Glutathione