¹H, ¹³C and ¹⁵N resonance assignment of the N-terminal domain of human lysyl aminoacyl tRNA synthetase

Biomol NMR Assign. 2013 Oct;7(2):289-92. doi: 10.1007/s12104-012-9430-x. Epub 2012 Oct 13.

Abstract

Human lysyl aminoacyl tRNA synthetase (hLysRS) is integral to a variety of different functions ranging from protein biosynthesis, initiation of a proinflammatory response as well as signal transduction. Another important, non-canonical function of hLysRS is that it chaperones tRNA(Lys,3), the HIV-1 reverse transcription primer molecule into new HIV-1 particles. Since the N-terminal domain of hLysRS has been shown to be essential for such primer uptake, NMR studies of this domain are being conducted to obtain a better understanding of how hLysRS interacts with the primer tRNA. In order to study the RNA binding behavior of this domain, we are studying its complex with a fragment of the cognate tRNA corresponding to the tRNA anticodon loop. We report herein the backbone and side chain NMR resonance assignments of uniformly (15)N-, (13)C-labeled hLysRS N-terminal domain alone, as well as complexed to RNA.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Carbon Isotopes
  • Humans
  • Lysine-tRNA Ligase / chemistry*
  • Molecular Sequence Data
  • Nitrogen Isotopes
  • Nuclear Magnetic Resonance, Biomolecular*
  • Protein Structure, Secondary
  • Protein Structure, Tertiary
  • Protons*

Substances

  • Carbon Isotopes
  • Nitrogen Isotopes
  • Protons
  • Lysine-tRNA Ligase