Japanese pear has a genetically controlled self-incompatibility system, but both the pollen-tube growth in a semi in vivo assay and fruit set after self-pollination differ considerably among cultivars. The percentage of styles in which pollen tubes have reached the base ranges from 0 to 36 %, a value determined by culture of styles in vitro, and fruit set ranges from 0.6 to 15.2 %. Based on these data, we have assigned a value for the self-incompatibility weakness to each cultivar. Here, we showed that pollen factors control the degree of self-incompatibility. When the pollen-tube growth of 13 cultivars was compared in a completely compatible 'Hougetsu' (S (1) S (7)) style, it differed a fair amount among cultivars and showed a significantly positive relation to self-incompatibility weakness (r = 0.707). The degree of self-incompatibility of pear is, therefore, determined by pollen factor(s) unrelated to the S-locus. Although the fruit set and fruit growth of 'Hougetsu' were not affected by the pollen donor, a positive relationship was also observed between seed number and self-incompatibility weakness (r = 0.972). However, in a style with no S-RNase production (genotype: S (4) (sm) S (4) (sm) ), the relationship disappeared (r = 0.341) and pollen-tube growth was promoted by 12-36 % except in one cultivar. These results suggest that S-RNase functions as a cytotoxin on compatible pollen in a cultivar-dependent manner, and that the degree of inhibition is determined by pollen factor(s) unrelated to the S-locus. The pollen factor also functions on S-RNase in incompatible styles, resulting in a different degree of self-incompatibility.