Applications of small-angle X-ray scattering to biomacromolecular solutions

Int J Biochem Cell Biol. 2013 Feb;45(2):429-37. doi: 10.1016/j.biocel.2012.10.017. Epub 2012 Nov 9.

Abstract

Small-angle scattering of X-rays (SAXS) is an established method for low-resolution structural characterization of biological macromolecules in solution. Being complementary to the high resolution methods (X-ray crystallography and NMR), SAXS is often used in combination with them. The technique provides overall three-dimensional structures using ab initio reconstructions and hybrid modeling, and allows one to quantitatively characterize equilibrium mixtures as well as flexible systems. Recent progress in SAXS instrumentation, most notably, high brilliance synchrotron sources, has paved the way for high throughput automated SAXS studies allowing screening of external conditions (pH, temperature, ligand binding etc.). The modern approaches for SAXS data analysis are presented in this review including rapid characterization of macromolecular solutions in terms of low-resolution shapes, validation of high-resolution models in close-to-native conditions, quaternary structure analysis of complexes and quantitative description of the oligomeric composition in mixtures. Practical aspects of SAXS as a standalone tool and its combinations with other structural, biophysical or bioinformatics methods are reviewed. The capabilities of the technique are illustrated by a selection of recent applications for the studies of biological molecules. Future perspectives on SAXS and its potential impact to structural molecular biology are discussed.

Publication types

  • Review

MeSH terms

  • Actins / chemistry
  • Animals
  • Calmodulin / chemistry
  • Dihydrolipoyllysine-Residue Acetyltransferase / chemistry
  • Glutamate Decarboxylase / chemistry
  • Humans
  • Models, Molecular*
  • Nuclear Magnetic Resonance, Biomolecular
  • Osmolar Concentration
  • Plant Proteins / chemistry
  • Protein Structure, Quaternary
  • Scattering, Small Angle
  • Solutions
  • X-Ray Diffraction

Substances

  • Actins
  • Calmodulin
  • Plant Proteins
  • Solutions
  • Dihydrolipoyllysine-Residue Acetyltransferase
  • Glutamate Decarboxylase