Crystallization and preliminary crystallographic analysis of 2-aminophenol 1,6-dioxygenase complexed with substrate and with an inhibitor

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2012 Nov 1;68(Pt 11):1337-40. doi: 10.1107/S1744309112038705. Epub 2012 Oct 30.

Abstract

Dioxygen activation implemented by nonhaem Fe(II) enzymes containing the 2-His-1-carboxylate facial triad has been extensively studied in recent years. Extradiol dioxygenase is the archetypal member of this superfamily and catalyzes the oxygenolytic ring opening of catechol analogues. Here, the crystallization and preliminary X-ray analysis of 2-aminophenol 1,6-dioxygenase, an enzyme representing a minor subset of extradiol dioxygenases that catalyze the fission of 2-aminophenol rather than catecholic compounds, is reported. Crystals of the holoenzyme with FeII and of complexes with the substrate 2-aminophenol and the suicide inhibitor 4-nitrocatechol were grown using the cocrystallization method under the same conditions as used for the crystallization of the apoenzyme. The crystals belonged to space group C2 and diffracted to 2.3-2.7 Å resolution; the crystal that diffracted to the highest resolution had unit-cell parameters a=270.24, b=48.39, c=108.55 Å, β=109.57°. All X-ray data sets collected from diffraction-quality crystals were suitable for structure determination.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Aminophenols / chemistry*
  • Apoenzymes / chemistry
  • Apoenzymes / isolation & purification
  • Bacterial Proteins / chemistry*
  • Bacterial Proteins / isolation & purification
  • Catechols / chemistry*
  • Chromatography, Gel
  • Chromatography, Ion Exchange
  • Comamonas testosteroni / enzymology*
  • Crystallization
  • Crystallography, X-Ray
  • Dioxygenases / chemistry*
  • Dioxygenases / isolation & purification
  • Enzyme Inhibitors / chemistry

Substances

  • Aminophenols
  • Apoenzymes
  • Bacterial Proteins
  • Catechols
  • Enzyme Inhibitors
  • 2-aminophenol
  • 2-aminophenol 1,6-dioxygenase
  • Dioxygenases
  • 4-nitrocatechol