A single N-acetylgalactosamine residue at threonine 106 modifies the dynamics and structure of interferon α2a around the glycosylation site

J Biol Chem. 2013 Jan 4;288(1):247-54. doi: 10.1074/jbc.M112.413252. Epub 2012 Nov 26.

Abstract

Enzymatic addition of GalNAc to isotopically labeled IFNα2a produced in Escherichia coli yielded the O-linked glycoprotein GalNAcα-[(13)C,(15)N]IFNα2a. The three-dimensional structure of GalNAcα-IFNα2a has been determined in solution by NMR spectroscopy at high resolution. Proton-nitrogen heteronuclear Overhauser enhancement measurements revealed that the addition of a single monosaccharide unit at Thr-106 significantly slowed motions of the glycosylation loop on the nanosecond time scale. Subsequent addition of a Gal unit produced Gal(β1,3)GalNAcα-[(13)C,(15)N]IFNα2a. This extension resulted in a further decrease in the dynamics of this loop. The methodology used here allowed the first such description of the structure and dynamics of an O-glycoprotein and opens the way to the study of this class of proteins.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Acetylgalactosamine / chemistry*
  • Acetylgalactosamine / genetics
  • Computational Biology / methods
  • Disulfides / chemistry
  • Escherichia coli / metabolism
  • Glycoproteins / chemistry
  • Glycosylation
  • Humans
  • Interferon alpha-2
  • Interferon-alpha / metabolism*
  • Interferons / chemistry
  • Magnetic Resonance Spectroscopy / methods
  • Models, Molecular
  • Molecular Conformation
  • Peptides / chemistry
  • Polysaccharides / chemistry*
  • Protein Conformation
  • Recombinant Proteins / metabolism
  • Threonine / chemistry*

Substances

  • Disulfides
  • Glycoproteins
  • Interferon alpha-2
  • Interferon-alpha
  • Peptides
  • Polysaccharides
  • Recombinant Proteins
  • Threonine
  • Interferons
  • Acetylgalactosamine

Associated data

  • PDB/2LMS