Crystallization and preliminary X-ray crystallographic analysis of quinolinate phosphoribosyltransferase from porcine kidney in complex with nicotinate mononucleotide

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2012 Dec 1;68(Pt 12):1488-90. doi: 10.1107/S1744309112040638. Epub 2012 Nov 14.

Abstract

Quinolinate phosphoribosyltransferase (QAPRTase) is a key enzyme in NAD biosynthesis; it catalyzes the formation of nicotinate mononucleotide (NAMN) from quinolinate and 5-phosphoribosyl-1-pyrophosphate. In order to elucidate the mechanism of NAMN biosynthesis, crystals of Sus scrofa QAPRTase (Ss-QAPRTase) purified from porcine kidney in complex with NAMN were obtained and diffraction data were collected and processed to 2.1 Å resolution. The Ss-QAPRTase-NAMN cocrystals belonged to space group P321, with unit-cell parameters a=119.1, b=119.1, c=93.7 Å, γ=120.0°. The Matthews coefficient and the solvent content were estimated as 3.10 Å3 Da(-1) and 60.3%, respectively, assuming the presence of two molecules in the asymmetric unit.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Crystallography, X-Ray
  • Kidney / enzymology*
  • Models, Molecular
  • Nicotinamide Mononucleotide / analogs & derivatives*
  • Nicotinamide Mononucleotide / chemistry
  • Nicotinamide Mononucleotide / metabolism
  • Pentosyltransferases / chemistry*
  • Pentosyltransferases / metabolism
  • Protein Conformation
  • Swine / metabolism

Substances

  • Nicotinamide Mononucleotide
  • nicotinate mononucleotide
  • Pentosyltransferases
  • nicotinate-nucleotide diphosphorylase (carboxylating)