QuickBundles, a Method for Tractography Simplification

Front Neurosci. 2012 Dec 11:6:175. doi: 10.3389/fnins.2012.00175. eCollection 2012.

Abstract

Diffusion MR data sets produce large numbers of streamlines which are hard to visualize, interact with, and interpret in a clinically acceptable time scale, despite numerous proposed approaches. As a solution we present a simple, compact, tailor-made clustering algorithm, QuickBundles (QB), that overcomes the complexity of these large data sets and provides informative clusters in seconds. Each QB cluster can be represented by a single centroid streamline; collectively these centroid streamlines can be taken as an effective representation of the tractography. We provide a number of tests to show how the QB reduction has good consistency and robustness. We show how the QB reduction can help in the search for similarities across several subjects.

Keywords: DTI; clustering algorithms; diffusion MRI; dimensionality reduction; fiber clustering; tractography; white matter segmentation.