A conserved asparagine has a structural role in ubiquitin-conjugating enzymes

Nat Chem Biol. 2013 Mar;9(3):154-6. doi: 10.1038/nchembio.1159. Epub 2013 Jan 6.

Abstract

It is widely accepted that ubiquitin-conjugating enzymes contain an active site asparagine that serves as an oxyanion hole, thereby stabilizing a negatively charged transition state intermediate and promoting ubiquitin transfer. Using structural and biochemical approaches to study the role of the conserved asparagine to ubiquitin conjugation by Ubc13-Mms2, we conclude that the importance of this residue stems primarily from its structural role in stabilizing an active site loop.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Asparagine / chemistry
  • Asparagine / metabolism*
  • Catalytic Domain
  • Conserved Sequence*
  • Models, Molecular
  • Protein Conformation
  • Ubiquitin / metabolism
  • Ubiquitin-Conjugating Enzymes / chemistry*
  • Ubiquitin-Conjugating Enzymes / metabolism*

Substances

  • Ubiquitin
  • Asparagine
  • Ubiquitin-Conjugating Enzymes

Associated data

  • PDB/4FH1