Rbfox3-regulated alternative splicing of Numb promotes neuronal differentiation during development

J Cell Biol. 2013 Feb 18;200(4):443-58. doi: 10.1083/jcb.201206146.

Abstract

Alternative premRNA splicing is a major mechanism to generate diversity of gene products. However, the biological roles of alternative splicing during development remain elusive. Here, we focus on a neuron-specific RNA-binding protein, Rbfox3, recently identified as the antigen of the widely used anti-NeuN antibody. siRNA-mediated loss-of-function studies using the developing chicken spinal cord revealed that Rbfox3 is required to promote neuronal differentiation of postmitotic neurons. Numb premRNA encoding a signaling adaptor protein was found to be a target of Rbfox3 action, and Rbfox3 repressed the inclusion of an alternative exon via binding to the conserved UGCAUG element in the upstream intron. Depleting a specific Numb splice isoform reproduced similar neuronal differentiation defects. Forced expression of the relevant Numb splice isoform was sufficient to rescue, in an isoform-specific manner, postmitotic neurons from defects in differentiation caused by Rbfox3 depletion. Thus, Rbfox3-dependent Numb alternative splicing plays an important role in the progression of neuronal differentiation during vertebrate development.

Publication types

  • Research Support, N.I.H., Intramural

MeSH terms

  • Alternative Splicing*
  • Animals
  • Binding Sites
  • Cell Line
  • Chick Embryo
  • DNA-Binding Proteins
  • Membrane Proteins / genetics
  • Membrane Proteins / physiology*
  • Mice
  • Nerve Tissue Proteins / genetics
  • Nerve Tissue Proteins / physiology*
  • Neural Tube / cytology
  • Neural Tube / metabolism
  • Neurogenesis*
  • Neurons / cytology*
  • Nuclear Proteins / physiology*
  • Protein Isoforms / metabolism
  • RNA Precursors / metabolism
  • RNA, Messenger / metabolism
  • Regulatory Elements, Transcriptional

Substances

  • DNA-Binding Proteins
  • Membrane Proteins
  • Nerve Tissue Proteins
  • NeuN protein, mouse
  • Nuclear Proteins
  • Numb protein, mouse
  • Protein Isoforms
  • RNA Precursors
  • RNA, Messenger