Phylogeographical studies of Ascaris spp. based on ribosomal and mitochondrial DNA sequences

PLoS Negl Trop Dis. 2013 Apr 11;7(4):e2170. doi: 10.1371/journal.pntd.0002170. Print 2013.

Abstract

Background: The taxonomic distinctiveness of Ascaris lumbricoides and A. suum, two of the world's most significant nematodes, still represents a much-debated scientific issue. Previous studies have described two different scenarios in transmission patterns, explained by two hypotheses: (1) separated host-specific transmission cycles in highly endemic regions, (2) a single pool of infection shared by humans and pigs in non-endemic regions. Recently, A. suum has been suggested as an important cause of human ascariasis in endemic areas such as China, where cross-infections and hybridization have also been reported. The main aims of the present study were to investigate the molecular epidemiology of human and pig Ascaris from non-endemic regions and, with reference to existing data, to infer the phylogenetic and phylogeographic relationships among the samples.

Methodology: 151 Ascaris worms from pigs and humans were characterized using PCR-RFLP on nuclear ITS rDNA. Representative geographical sub-samples were also analysed by sequencing a portion of the mitochondrial cox1 gene, to infer the extent of variability at population level. Sequence data were compared to GenBank sequences from endemic and non-endemic regions.

Principal findings: No fixed differences between human and pig Ascaris were evident, with the exception of the Slovak population, which displays significant genetic differentiation. The RFLP analysis confirmed pig as a source of human infection in non-endemic regions and as a corridor for the promulgation of hybrid genotypes. Epidemiology and host-affiliation seem not to be relevant in shaping molecular variance. Phylogenetic and phylogeographical analyses described a complex scenario, involving multiple hosts, sporadic contact between forms and an ancestral taxon referable to A. suum.

Conclusions/significance: These results suggest the existence of homogenizing gene flow between the two taxa, which appear to be variants of a single polytypic species. This conclusion has implications on the systematics, transmission and control programs relating to ascariasis.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Ascaris / classification
  • Ascaris / genetics*
  • DNA, Mitochondrial / genetics*
  • DNA, Ribosomal / genetics*
  • Gene Flow / genetics
  • Humans
  • Phylogeography*
  • Polymorphism, Restriction Fragment Length / genetics
  • Swine

Substances

  • DNA, Mitochondrial
  • DNA, Ribosomal

Grants and funding

This work was partially supported in the framework of the Executive Programme of Scientific and Technological co-operation between Italy and Slovakia for the years 2008–2010 (http://www.esteri.it/MAE/doc_politica_estera/Cultura/CooperScientificaTecnologica/Programmi%20esecutivi/82_Slovacchia_PE_ST.pdf). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.