Residues of a proposed gate region in type I ATP-binding cassette import systems are crucial for function as revealed by mutational analysis

Biochim Biophys Acta. 2013 Sep;1828(9):2164-72. doi: 10.1016/j.bbamem.2013.05.032. Epub 2013 Jun 6.

Abstract

The type I ATP-binding cassette (ABC) importer for positively charged amino acids of the thermophilic bacterium Geobacillus stearothermophilus consists of the extracellular solute binding protein, ArtJ, and a homodimer each of the transmembrane subunit, ArtM, and the nucleotide-binding and -hydrolyzing subunit, ArtP. We have investigated the functional consequences of mutations affecting conserved residues from two peptide regions in ArtM, recently proposed to form a 'gate' by which access of a substrate to the translocation path is controlled (Hollenstein et al., 2007 [14]). Transporter variants were reconstituted into proteoliposomes and assayed for ArtJ/arginine-stimulated ATPase activity. Replacement of residues from region 1 (Arg-63, Pro-66) caused no or only moderate reduction in ATPase activity. In contrast, mutating residues from gate region 2 (Lys-159, Leu-163) resulted in a substantial increase in ATPase activity which, however, as demonstrated for variants ArtM(K159I) and ArtM(K159E), is not coupled to transport. Replacing homologous residues in the closely related histidine transporter of Salmonella enterica serovar Typhimurium (HisJ-QMP2) caused different phenotypes. Mutation to isoleucine of HisQ(K163) or HisM(H172), both homologous to ArtM(K159), abolished ATPase activity. The mutations most likely caused a structural change as revealed by limited proteolysis. In contrast, substantial, albeit reduced, enzymatic activity was observed with variants of HisQ(L167→G) or HisM(L176→G), both homologous to ArtM(L163). Our study provides the first experimental evidence in favor of a crucial role of residues from the proposed gate region in type I ABC importer function.

Keywords: 3-(N-morpholino)-propanesulfonic acid; ABC; ABC transporter; ATP-binding cassette; DDM; His-tag; IPTG; MOPS; OG; PMSF; Periplasmic gate; Positively charged amino acid; Solute binding protein; Thermophile; Type I importer; hexahistidine tag; isopropyl-β-D-thio-galactopyranoside; n-dodecyl-β-D-maltopyranoside; octyl-ß-D-glucopyranoside; phenylmethylsulfonylfluoride.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • ATP-Binding Cassette Transporters / chemistry*
  • ATP-Binding Cassette Transporters / genetics
  • ATP-Binding Cassette Transporters / metabolism
  • Amino Acid Sequence
  • Amino Acid Substitution
  • Amino Acids / chemistry
  • Amino Acids / genetics
  • Bacterial Proteins / chemistry*
  • Bacterial Proteins / genetics
  • Bacterial Proteins / metabolism
  • Geobacillus stearothermophilus / chemistry*
  • Geobacillus stearothermophilus / genetics
  • Geobacillus stearothermophilus / metabolism
  • Models, Molecular
  • Molecular Sequence Data
  • Mutation
  • Protein Subunits / chemistry*
  • Protein Subunits / genetics
  • Protein Subunits / metabolism
  • Proteolipids / chemistry*
  • Proteolipids / metabolism
  • Recombinant Proteins / chemistry
  • Recombinant Proteins / genetics
  • Recombinant Proteins / metabolism
  • Salmonella typhimurium / chemistry
  • Salmonella typhimurium / genetics
  • Sequence Homology, Amino Acid
  • Structure-Activity Relationship

Substances

  • ATP-Binding Cassette Transporters
  • Amino Acids
  • Bacterial Proteins
  • Protein Subunits
  • Proteolipids
  • Recombinant Proteins
  • proteoliposomes