Phylogeny and establishment of a new ciliate family, Wilbertomorphidae fam. nov. (Ciliophora, Karyorelictea), a highly specialized taxon represented by Wilbertomorpha colpoda gen. nov., spec. nov

J Eukaryot Microbiol. 2013 Sep-Oct;60(5):480-9. doi: 10.1111/jeu.12055. Epub 2013 Jul 6.

Abstract

The morphology and molecular phylogeny of a new marine interstitial karyorelictean ciliate, Wilbertomorpha colpoda gen. nov., spec. nov., isolated from a sandy beach at Qingdao, China, are investigated. The ciliature is mainly on the right surface with the left surface barren except for a single marginal kinety, which is typical of the order Loxodida. Nevertheless, other morphological features, such as the highly reduced buccal structure, the absence of a buccal cavity and the presence of extremely specialized cortical granules, prevent its assignation to any known family. Furthermore, the secondary structure of the variable region 2 of the SSU rRNA gene is unique among loxodids. Thus, we establish a new family, Wilbertomorphidae fam. nov. for the genus Wilbertomorpha. Phylogenetic analyses based on SSU rRNA gene sequence data suggest that this taxon is a sister group to the family Geleiidae which belongs to the order Protoheterotrichida. However, morphologically Wilbertomorpha bears a much stronger resemblance to Loxodidae which belongs to the order Loxodida. Based on these findings, we tentatively place Wilbertomorphidae nov. fam. incertae sedis within Karyorelictea.

Keywords: AU test; Loxodida; SSU rRNA gene; marine ciliates; secondary structure; taxonomy.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • China
  • Ciliophora / classification*
  • Ciliophora / cytology
  • Ciliophora / genetics
  • Ciliophora / isolation & purification*
  • Cluster Analysis
  • DNA, Protozoan / chemistry
  • DNA, Protozoan / genetics
  • DNA, Ribosomal / chemistry
  • DNA, Ribosomal / genetics
  • Environmental Microbiology
  • Genes, rRNA
  • Microscopy
  • Molecular Sequence Data
  • Phylogeny
  • RNA, Protozoan / genetics
  • RNA, Ribosomal, 18S / genetics
  • Sequence Analysis, DNA

Substances

  • DNA, Protozoan
  • DNA, Ribosomal
  • RNA, Protozoan
  • RNA, Ribosomal, 18S

Associated data

  • GENBANK/JX204736
  • GENBANK/KC461119