Structural characterization of the RLCK family member BSK8: a pseudokinase with an unprecedented architecture

J Mol Biol. 2013 Nov 15;425(22):4455-67. doi: 10.1016/j.jmb.2013.07.034. Epub 2013 Aug 2.

Abstract

Brassinosteroid signaling kinases (BSKs) are plant-specific receptor-like cytoplasmic protein kinases involved in the brassinosteroid signaling pathway. Unlike common protein kinases, they possess a naturally occurring alanine residue at the "gatekeeper" position, as well as other sequence variations. How BSKs activate downstream proteins such as BSU1, as well as the structural consequences of their unusual sequential features, was unclear. We crystallized the catalytic domain of BSK8 and solved its structure by multiple-wavelength anomalous dispersion phasing methods to a resolution of 1.5Å. In addition, a co-crystal structure of BSK8 with 5-adenylyl imidodiphosphate (AMP-PNP) revealed unusual conformational arrangements of the nucleotide phosphate groups and catalytic key motifs, typically not observed for active protein kinases. Sequential analysis and comparisons with known pseudokinase structures suggest that BSKs represent constitutively inactive protein kinases that regulate brassinosteroid signal transfer through an allosteric mechanism.

Keywords: BR; BR signaling kinase (BSK); BSK; ILK; MAD; PEG; TPR; X-ray crystallography; brassinosteroid; brassinosteroid (BR) signaling; brassinosteroid signaling kinase; integrin-linked kinase; multiple-wavelength anomalous dispersion; polyethylene glycol; pseudokinase; receptor-like protein kinases; tetratricopeptide repeat.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Motifs
  • Amino Acid Sequence
  • Arabidopsis Proteins / chemistry*
  • Arabidopsis Proteins / metabolism
  • Binding Sites
  • Catalytic Domain
  • Models, Molecular
  • Protein Binding
  • Protein Conformation
  • Protein Interaction Domains and Motifs
  • Protein Kinases / chemistry*
  • Protein Kinases / metabolism

Substances

  • Arabidopsis Proteins
  • Protein Kinases