Synthesis and biophysical properties of constrained D-altritol nucleic acids (cANA)

Org Lett. 2013 Sep 6;15(17):4316-9. doi: 10.1021/ol401730d. Epub 2013 Aug 13.

Abstract

The first synthesis of constrained altritol nucleic acids (cANA) containing antisense oligonucleotides (ASOs) was carried out to ascertain how conformationally restricting the D-altritol backbone-containing ASO (Me-ANA) would affect their ability to form duplexes with RNA. It was found that the thermal stability was reduced (cANA/RNA -1.1 °C/modification) compared to DNA/RNA, suggesting the constrained system results in a small destabilizing perturbation in the duplex structure.

MeSH terms

  • DNA / chemistry
  • Molecular Structure
  • Nucleic Acids / chemistry*
  • Oligonucleotides, Antisense / chemical synthesis*
  • Oligonucleotides, Antisense / chemistry
  • RNA / chemistry
  • Stereoisomerism
  • Sugar Alcohols / chemistry*

Substances

  • Nucleic Acids
  • Oligonucleotides, Antisense
  • Sugar Alcohols
  • altritol
  • RNA
  • DNA