Draft Genome Sequence of the Cellulolytic Bacterium Clostridium papyrosolvens C7 (ATCC 700395)

doi:10.1128/genomeA.00698-13

. 2013 Sep 12;1(5):e00698-13.

doi: 10.1128/genomeA.00698-13.

Draft Genome Sequence of the Cellulolytic Bacterium Clostridium papyrosolvens C7 (ATCC 700395)

Veronica Zepeda¹, Bareket Dassa, Ilya Borovok, Raphael Lamed, Edward A Bayer, Jamie H D Cate

Affiliations

PMID: 24029755
PMCID: PMC3772139
DOI: 10.1128/genomeA.00698-13

Draft Genome Sequence of the Cellulolytic Bacterium Clostridium papyrosolvens C7 (ATCC 700395)

Veronica Zepeda et al. Genome Announc. 2013.

. 2013 Sep 12;1(5):e00698-13.

doi: 10.1128/genomeA.00698-13.

Authors

Veronica Zepeda¹, Bareket Dassa, Ilya Borovok, Raphael Lamed, Edward A Bayer, Jamie H D Cate

Affiliation

¹ Department of Molecular and Cell Biology, University of California, Berkeley, California, USA.

PMID: 24029755
PMCID: PMC3772139
DOI: 10.1128/genomeA.00698-13

Abstract

We report the draft genome sequence of the cellulose-degrading bacterium Clostridium papyrosolvens C7, originally isolated from mud collected below a freshwater pond in Massachusetts. This Gram-positive bacterium grows in a mesophilic anaerobic environment with filter paper as the only carbon source, and it has a simple cellulosome system with multiple carbohydrate-degrading enzymes.

PubMed Disclaimer

Cited by

Characterization of D-Allulose-3-Epimerase From Ruminiclostridium papyrosolvens and Immobilization Within Metal-Organic Frameworks.
Yang J, Fan D, Zhao F, Lin Y, Zheng S, Han S. Yang J, et al. Front Bioeng Biotechnol. 2022 Apr 14;10:869536. doi: 10.3389/fbioe.2022.869536. eCollection 2022. Front Bioeng Biotechnol. 2022. PMID: 35497354 Free PMC article.
Secretomic analyses of Ruminiclostridium papyrosolvens reveal its enzymatic basis for lignocellulose degradation.
Ren Z, You W, Wu S, Poetsch A, Xu C. Ren Z, et al. Biotechnol Biofuels. 2019 Jul 15;12:183. doi: 10.1186/s13068-019-1522-8. eCollection 2019. Biotechnol Biofuels. 2019. PMID: 31338125 Free PMC article.
Assembly of Synthetic Functional Cellulosomal Structures onto the Cell Surface of Lactobacillus plantarum, a Potent Member of the Gut Microbiome.
Stern J, Moraïs S, Ben-David Y, Salama R, Shamshoum M, Lamed R, Shoham Y, Bayer EA, Mizrahi I. Stern J, et al. Appl Environ Microbiol. 2018 Apr 2;84(8):e00282-18. doi: 10.1128/AEM.00282-18. Print 2018 Apr 15. Appl Environ Microbiol. 2018. PMID: 29453253 Free PMC article.
Revisiting the Regulation of the Primary Scaffoldin Gene in Clostridium thermocellum.
Ortiz de Ora L, Muñoz-Gutiérrez I, Bayer EA, Shoham Y, Lamed R, Borovok I. Ortiz de Ora L, et al. Appl Environ Microbiol. 2017 Mar 31;83(8):e03088-16. doi: 10.1128/AEM.03088-16. Print 2017 Apr 15. Appl Environ Microbiol. 2017. PMID: 28159788 Free PMC article.
Cellulosomics of the cellulolytic thermophile Clostridium clariflavum.
Artzi L, Dassa B, Borovok I, Shamshoum M, Lamed R, Bayer EA. Artzi L, et al. Biotechnol Biofuels. 2014 Jul 1;7:100. doi: 10.1186/1754-6834-7-100. eCollection 2014. Biotechnol Biofuels. 2014. PMID: 26413154 Free PMC article.

References

1. Somerville C, Bauer S, Brininstool G, Facette M, Hamann T, Milne J, Osborne E, Paredez A, Persson S, Raab T, Vorwerk S, Youngs H. 2004. Toward a systems approach to understanding plant cell walls. Science 306:2206–2211 - PubMed
1. Baldrian P, Valásková V. 2008. Degradation of cellulose by basidiomycetous fungi. FEMS Microbiol. Rev. 32:501–521 - PubMed
1. Maki M, Leung KT, Qin W. 2009. The prospects of cellulase-producing bacteria for the bioconversion of lignocellulosic biomass. Int. J. Biol. Sci. 5:500–516 - PMC - PubMed
1. Bayer EA, Morag E, Lamed R. 1994. The cellulosome—a treasure-trove for biotechnology. Trends Biotechnol. 12:379–386 - PubMed
1. Fontes CM, Gilbert HJ. 2010. Cellulosomes: highly efficient nanomachines designed to deconstruct plant cell wall complex carbohydrates. Annu. Rev. Biochem. 79:655–681 - PubMed

LinkOut - more resources

Full Text Sources
Other Literature Sources
- scite Smart Citations
Molecular Biology Databases
- REBASE - The Restriction Enzyme Database
- SILVA
Miscellaneous
- NCI CPTAC Assay Portal

[1] Somerville C, Bauer S, Brininstool G, Facette M, Hamann T, Milne J, Osborne E, Paredez A, Persson S, Raab T, Vorwerk S, Youngs H. 2004. Toward a systems approach to understanding plant cell walls. Science 306:2206–2211 - PubMed

[2] Somerville C, Bauer S, Brininstool G, Facette M, Hamann T, Milne J, Osborne E, Paredez A, Persson S, Raab T, Vorwerk S, Youngs H. 2004. Toward a systems approach to understanding plant cell walls. Science 306:2206–2211 - PubMed

[3] Baldrian P, Valásková V. 2008. Degradation of cellulose by basidiomycetous fungi. FEMS Microbiol. Rev. 32:501–521 - PubMed

[4] Baldrian P, Valásková V. 2008. Degradation of cellulose by basidiomycetous fungi. FEMS Microbiol. Rev. 32:501–521 - PubMed

[5] Maki M, Leung KT, Qin W. 2009. The prospects of cellulase-producing bacteria for the bioconversion of lignocellulosic biomass. Int. J. Biol. Sci. 5:500–516 - PMC - PubMed

[6] Maki M, Leung KT, Qin W. 2009. The prospects of cellulase-producing bacteria for the bioconversion of lignocellulosic biomass. Int. J. Biol. Sci. 5:500–516 - PMC - PubMed

[7] Bayer EA, Morag E, Lamed R. 1994. The cellulosome—a treasure-trove for biotechnology. Trends Biotechnol. 12:379–386 - PubMed

[8] Bayer EA, Morag E, Lamed R. 1994. The cellulosome—a treasure-trove for biotechnology. Trends Biotechnol. 12:379–386 - PubMed

[9] Fontes CM, Gilbert HJ. 2010. Cellulosomes: highly efficient nanomachines designed to deconstruct plant cell wall complex carbohydrates. Annu. Rev. Biochem. 79:655–681 - PubMed

[10] Fontes CM, Gilbert HJ. 2010. Cellulosomes: highly efficient nanomachines designed to deconstruct plant cell wall complex carbohydrates. Annu. Rev. Biochem. 79:655–681 - PubMed

Save citation to file

Email citation

Add to Collections

Add to My Bibliography

Your saved search

Create a file for external citation management software

Your RSS Feed

Draft Genome Sequence of the Cellulolytic Bacterium Clostridium papyrosolvens C7 (ATCC 700395)

Affiliation

Draft Genome Sequence of the Cellulolytic Bacterium Clostridium papyrosolvens C7 (ATCC 700395)

Authors

Affiliation

Abstract

Similar articles

Cited by

References

LinkOut - more resources

Full Text Sources

Other Literature Sources

Molecular Biology Databases

Miscellaneous

Abstract

Similar articles

Cited by

References

Related information

LinkOut - more resources

Full Text Sources

Other Literature Sources

Molecular Biology Databases

Miscellaneous