Structural insights into the SENP6 Loop1 structure in complex with SUMO2

Protein Sci. 2014 Apr;23(4):433-41. doi: 10.1002/pro.2425. Epub 2014 Mar 10.

Abstract

The SENP proteases regulate the SUMO conjugates in the cell by cleaving SUMO from target proteins. SENP6 and SENP7 are the most divergent members of the SENP/ULP protease family in humans by the presence of insertions in their catalytic domains. Loop1 insertion is determinant for the SUMO2/3 activity and specificity on SENP6 and SENP7. To gain structural insights into the role of Loop1, we have designed a chimeric SENP2 with the insertion of Loop1 into its sequence. The structure of SENP2-Loop1 in complex with SUMO2 was solved at 2.15 Å resolution, and reveals the details of an interface exclusive to SENP6/7 and the formation of unique contacts between both proteins. Interestingly, functional data with SUMO substrates showed an increase of the proteolytic activity in the SENP2-Loop1 chimera for diSUMO2 and polySUMO2 substrates.

Keywords: SENP2; SENP6; SENP7; SUMO; polySUMO chain; ubiquitin-like protein.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Cysteine Endopeptidases / chemistry*
  • Cysteine Endopeptidases / metabolism
  • Humans
  • Models, Molecular
  • Protein Conformation
  • Small Ubiquitin-Related Modifier Proteins / chemistry*
  • Small Ubiquitin-Related Modifier Proteins / metabolism

Substances

  • SUMO2 protein, human
  • Small Ubiquitin-Related Modifier Proteins
  • Cysteine Endopeptidases
  • SENP6 protein, human

Associated data

  • PDB/3ZO5