Differential SPL gene expression patterns reveal candidate genes underlying flowering time and architectural differences in Mimulus and Arabidopsis

Mol Phylogenet Evol. 2014 Apr:73:129-39. doi: 10.1016/j.ympev.2014.01.029. Epub 2014 Feb 7.

Abstract

Evolutionary transitions in growth habit and flowering time responses to variable environmental signals have occurred multiple times independently across angiosperms and have major impacts on plant fitness. Proteins in the SPL family of transcription factors collectively regulate flowering time genes that have been implicated in interspecific shifts in annuality/perenniality. However, their potential importance in the evolution of angiosperm growth habit has not been extensively investigated. Here we identify orthologs representative of the major SPL gene clades in annual Arabidopsis thaliana and Mimulus guttatus IM767, and perennial A. lyrata and M. guttatus PR, and characterize their expression. Spatio-temporal expression patterns are complex across both diverse tissues of the same taxa and comparable tissues of different taxa, consistent with genic sub- or neo-functionalization. However, our data are consistent with a general role for several SPL genes in the promotion of juvenile to adult phase change and/or flowering time in Mimulus and Arabidopsis. Furthermore, several candidate genes were identified for future study whose differential expression correlates with growth habit and architectural variation in annual versus perennial taxa.

Keywords: Arabidopsis; Branching; Flowering time; Growth habit; Mimulus guttatus; SPL genes.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Arabidopsis / anatomy & histology*
  • Arabidopsis / genetics*
  • Arabidopsis / growth & development
  • Arabidopsis Proteins / genetics*
  • Arabidopsis Proteins / metabolism
  • Flowers / genetics
  • Flowers / growth & development*
  • Gene Duplication
  • Gene Expression Profiling
  • Gene Expression Regulation, Plant / genetics*
  • Genes, Plant / genetics
  • Mimulus / anatomy & histology*
  • Mimulus / genetics*
  • Mimulus / growth & development
  • Nuclear Proteins / genetics*
  • Nuclear Proteins / metabolism
  • Repressor Proteins / genetics*
  • Repressor Proteins / metabolism
  • Spatio-Temporal Analysis
  • Time Factors
  • Transcription Factors / genetics
  • Transcription Factors / metabolism

Substances

  • Arabidopsis Proteins
  • Nuclear Proteins
  • Repressor Proteins
  • SPL protein, Arabidopsis
  • Transcription Factors