RapidMic: Rapid Computation of the Maximal Information Coefficient

Evol Bioinform Online. 2014 Feb 6:10:11-6. doi: 10.4137/EBO.S13121. eCollection 2014.

Abstract

To discover relationships and associations rapidly in large-scale datasets, we propose a cross-platform tool for the rapid computation of the maximal information coefficient based on parallel computing methods. Through parallel processing, the provided tool can effectively analyze large-scale biological datasets with a markedly reduced computing time. The experimental results show that the proposed tool is notably fast, and is able to perform an all-pairs analysis of a large biological dataset using a normal computer. The source code and guidelines can be downloaded from https://github.com/HelloWorldCN/RapidMic.

Keywords: algorithms; computational biology; gene expression; software; statistical analysis.