BioJS DAGViewer: A reusable JavaScript component for displaying directed graphs

F1000Res. 2014 Feb 13;3:51. doi: 10.12688/f1000research.3-51.v1. eCollection 2014.

Abstract

Summary: The DAGViewer BioJS component is a reusable JavaScript component made available as part of the BioJS project and intended to be used to display graphs of structured data, with a particular emphasis on Directed Acyclic Graphs (DAGs). It enables users to embed representations of graphs of data, such as ontologies or phylogenetic trees, in hyper-text documents (HTML). This component is generic, since it is capable (given the appropriate configuration) of displaying any kind of data that is organised as a graph. The features of this component which are useful for examining and filtering large and complex graphs are described.

Availability: http://github.com/alexkalderimis/dag-viewer-biojs; http://github.com/biojs/biojs; http://dx.doi.org/10.5281/zenodo.8303.

Grant support

InterMine has been developed with the support of the following grants, awarded to Dr. G. Micklem: the Wellcome Trust (Grant number: 090297), and the National Human Genome Research Institute (Grant number: R01HG004834). The content is solely the responsibility of the authors and does not necessarily represent the official views of the funding bodies.