Paenibacillus humi sp. nov., isolated from peat-soil

J Gen Appl Microbiol. 2014;60(1):23-7. doi: 10.2323/jgam.60.23.

Abstract

A Gram-positive, facultative-anaerobic, rod-shaped and endospore-forming bacterium designated as strain J30-4(T) was isolated from peat-soil collected in Russia. 16S rRNA gene sequence analysis revealed that strain belongs to the genus Paenibacillus, closely related to Paenibacillus terrigena A35(T) (98.1%) and Paenibacillus harenae B519(T) (95.5%). Chemotaxonomic analysis revealed that strain J30-4(T) possessed menaquinone MK-7 as predominant quinone and diphosphatidylglycerol, phosphatidylglycerol, phosphatidyl-ethanolamine, phosphatidyl-N-methylethanolamine and several unknown lipids were detected in the polar lipid profile. The cell wall peptidoglycan was of the A1γ type (meso-diaminopimelic acid). The major fatty acids were anteiso-C₁₅:₀ and iso-C₁₆:₀. The DNA G+C content of J30-4(T) was 55.5 mol%. Based on phenotypic, chemotaxonomic and phylogenetic data presented in this study, strain J30-4(T) (= KEMC 7302-014(T) = JCM 18166(T)) is indicative of a new Paenibacillus species, for which the name Paenibacillus humi sp. nov., is proposed.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Base Composition
  • DNA, Bacterial / genetics
  • Genes, Bacterial
  • Genes, rRNA
  • Lipid Metabolism
  • Molecular Sequence Data
  • Paenibacillus / genetics*
  • Paenibacillus / isolation & purification*
  • Paenibacillus / metabolism
  • Phenotype
  • Phylogeny
  • RNA, Bacterial / genetics
  • RNA, Ribosomal, 16S / genetics
  • Russia
  • Soil Microbiology
  • Species Specificity
  • Vitamin K 2 / analogs & derivatives
  • Vitamin K 2 / metabolism

Substances

  • DNA, Bacterial
  • RNA, Bacterial
  • RNA, Ribosomal, 16S
  • Vitamin K 2
  • menaquinone 7

Associated data

  • GENBANK/JQ966213