Cryptic MHC class I-binding peptides are revealed by aminoglycoside-induced stop codon read-through into the 3' UTR

Proc Natl Acad Sci U S A. 2014 Apr 15;111(15):5670-5. doi: 10.1073/pnas.1402670111. Epub 2014 Mar 31.

Abstract

Aminoglycosides have been proposed as therapies for genetic disorders caused by nonsense mutations, because of their capacity to enhance translational read-through of premature termination codons (PTCs), thereby permitting expression of functional full-length protein. However, a potential consequence of this strategy is the development of an autoimmune response to HLA-presented epitopes encoded downstream of the PTC or other stop codons. Using a recombinant virus-expression system in tissue culture and in mice, we demonstrate that gentamicin can induce expression and MHC class I presentation of a model epitope encoded downstream of a PTC at levels sufficient to activate CD8(+) T cells. The degree of read-through-derived peptide presentation varies with the sequence of the stop codon and +1 nucleotide. Additionally, we applied a mass spectrometry exploration of the HLA class I peptide repertoire of gentamicin-treated cells and identified multiple peptides derived from read-through of conventional stop codons. These results substantiate the possibility of self-reactivity to cryptic epitopes revealed by stop codon read-through therapies and potentially other therapeutic approaches involving compounds that alter translational fidelity.

Keywords: antigen presentation; autoimmunity; recoding.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • 3' Untranslated Regions / genetics
  • Animals
  • Antibodies, Monoclonal
  • Blotting, Western
  • CD8-Positive T-Lymphocytes / immunology
  • Codon, Nonsense / genetics
  • Epitopes, T-Lymphocyte / immunology
  • Gene Expression Regulation / drug effects*
  • Gene Expression Regulation / immunology
  • Gentamicins / pharmacology*
  • Immunoprecipitation
  • Luciferases
  • Mice
  • Oligonucleotides / genetics
  • Oligopeptides / genetics*
  • Oligopeptides / metabolism
  • Peptide Chain Elongation, Translational / drug effects*
  • Peptide Chain Elongation, Translational / genetics
  • Tandem Mass Spectrometry

Substances

  • 3' Untranslated Regions
  • Antibodies, Monoclonal
  • Codon, Nonsense
  • Epitopes, T-Lymphocyte
  • Gentamicins
  • MHC binding peptide
  • Oligonucleotides
  • Oligopeptides
  • Luciferases