Designed abscisic acid analogs as antagonists of PYL-PP2C receptor interactions

Nat Chem Biol. 2014 Jun;10(6):477-82. doi: 10.1038/nchembio.1524. Epub 2014 May 4.

Abstract

The plant stress hormone abscisic acid (ABA) is critical for several abiotic stress responses. ABA signaling is normally repressed by group-A protein phosphatases 2C (PP2Cs), but stress-induced ABA binds Arabidopsis PYR/PYL/RCAR (PYL) receptors, which then bind and inhibit PP2Cs. X-ray structures of several receptor-ABA complexes revealed a tunnel above ABA's 3' ring CH that opens at the PP2C binding interface. Here, ABA analogs with sufficiently long 3' alkyl chains were predicted to traverse this tunnel and block PYL-PP2C interactions. To test this, a series of 3'-alkylsulfanyl ABAs were synthesized with different alkyl chain lengths. Physiological, biochemical and structural analyses revealed that a six-carbon alkyl substitution produced a potent ABA antagonist that was sufficiently active to block multiple stress-induced ABA responses in vivo. This study provides a new approach for the design of ABA analogs, and the results validated structure-based design for this target class.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Abscisic Acid / analogs & derivatives*
  • Abscisic Acid / chemical synthesis
  • Abscisic Acid / pharmacology
  • Arabidopsis / drug effects
  • Arabidopsis / genetics
  • Arabidopsis / metabolism
  • Arabidopsis Proteins / antagonists & inhibitors*
  • Arabidopsis Proteins / metabolism
  • Germination / drug effects
  • Lactuca / drug effects
  • Lactuca / metabolism
  • Models, Molecular
  • Phosphoprotein Phosphatases / antagonists & inhibitors*
  • Phosphoprotein Phosphatases / metabolism
  • Plant Growth Regulators* / chemical synthesis
  • Plant Growth Regulators* / pharmacology
  • Plant Physiological Phenomena
  • Protein Binding
  • Raphanus / drug effects
  • Raphanus / metabolism
  • Seeds / drug effects
  • Seeds / metabolism
  • Structure-Activity Relationship

Substances

  • Arabidopsis Proteins
  • Plant Growth Regulators
  • Abscisic Acid
  • Phosphoprotein Phosphatases

Associated data

  • PDB/3WG8
  • PubChem-Substance/175605706
  • PubChem-Substance/175605707
  • PubChem-Substance/175605708
  • PubChem-Substance/175605709
  • PubChem-Substance/175605710
  • PubChem-Substance/175605711
  • PubChem-Substance/175605712
  • PubChem-Substance/175605713
  • PubChem-Substance/175605714
  • PubChem-Substance/175605715
  • PubChem-Substance/175605716
  • PubChem-Substance/175605717
  • PubChem-Substance/175605718