Dyella jejuensis sp. nov., isolated from soil of Hallasan Mountain in Jeju Island

J Microbiol. 2014 May;52(5):373-7. doi: 10.1007/s12275-014-3670-7. Epub 2014 May 9.

Abstract

A novel bacterium, designated JP1(T), was isolated from soil of Hallasan Mountain in Jeju Island. The isolate was a Gramnegative, aerobic, motile and rod-shaped (0.2-0.4 × 1.2-2.0 μm) bacterium. Phylogenetic analysis based on the 16S rRNA gene sequence showed that strain JP1(T) was closely related to Dyella koreensis with 97.6% similarity. Growth of strain JP1(T) occurred at 10-37°C, pH 5-7 and 0-1% (w/v) NaCl. The genomic DNA G+C content of strain JP1(T) was 62.1 mol%. The major fatty acids were iso-C16:0, iso-C17:1 ω9c, and iso-C15:0. The predominant quinone was ubiquinone-8. The major polar lipids of strain JP1(T) were phosphatidylglycerol, phosphatidylethanolamine, diphosphatidylglycerol, unidentified aminolipids and unidentified aminophospholipids. The DNA-DNA relatedness values between strain JP1(T) and previously reported Dyella species were <10%. Based on phenotypic, genotypic, and phylogenetic distinctness, strain JP1(T) represents a novel species in the genus Dyella, for which the name Dyella jejuensis sp. nov. is proposed. The type strain is JP1(T) (=KACC 17701(T) =JCM 19615(T)).

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Aerobiosis
  • Bacterial Typing Techniques
  • Base Composition
  • Cluster Analysis
  • DNA, Bacterial / chemistry
  • DNA, Bacterial / genetics
  • DNA, Ribosomal / chemistry
  • DNA, Ribosomal / genetics
  • Fatty Acids / analysis
  • Hydrogen-Ion Concentration
  • Locomotion
  • Molecular Sequence Data
  • Nucleic Acid Hybridization
  • Phospholipids / analysis
  • Phylogeny
  • Quinones / analysis
  • RNA, Ribosomal, 16S / genetics
  • Republic of Korea
  • Sequence Analysis, DNA
  • Sodium Chloride / metabolism
  • Soil Microbiology*
  • Temperature
  • Xanthomonadaceae / classification*
  • Xanthomonadaceae / genetics
  • Xanthomonadaceae / isolation & purification*
  • Xanthomonadaceae / physiology

Substances

  • DNA, Bacterial
  • DNA, Ribosomal
  • Fatty Acids
  • Phospholipids
  • Quinones
  • RNA, Ribosomal, 16S
  • Sodium Chloride