Kinetic investigation of the rate-limiting step of manganese- and iron-lipoxygenases

Arch Biochem Biophys. 2014 Aug:555-556:9-15. doi: 10.1016/j.abb.2014.05.014. Epub 2014 May 21.

Abstract

Lipoxygenases (LOX) oxidize polyunsaturated fatty acids to hydroperoxides, which are generated by proton coupled electron transfer to the metal center with FeIIIOH- or MnIIIOH-. Hydrogen abstraction by FeIIIOH- of soybean LOX-1 (sLOX-1) is associated with a large deuterium kinetic isotope effect (D-KIE). Our goal was to compare the D-KIE and other kinetic parameters at different temperatures of sLOX-1 with 13R-LOX with catalytic manganese (13R-MnLOX). The reaction rate and the D-KIE of sLOX-1 with unlabeled and [11-2H2]18:2n-6 were almost temperature independent with an apparent D-KIE of ∼56 at 30°C, which is in agreement with previous studies. In contrast, the reaction rate of 13R-MnLOX increased 7-fold with temperature (8-50°C), and the apparent D-KIE decreased linearly from ∼38 at 8°C to ∼20 at 50°C. The kinetic lag phase of 13R-MnLOX was consistently extended at low temperatures. The Phe337Ile mutant of 13R-MnLOX, which catalyzes antarafacial hydrogen abstraction and oxygenation in analogy with sLOX-1, retained the large D-KIE and its temperature-dependent reaction rate. The kinetic differences between 13R-MnLOX and sLOX-1 may be due to protein dynamics, hydrogen donor-acceptor distances, and to the metal ligands, which may not equalize the 0.7V-gap between the redox potentials of the free metals.

Keywords: Arrhenius plot; Deuterium kinetic isotope effect; Hydrogen abstraction; Hydrogen tunneling; Site-directed mutagenesis.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Arachidonate 15-Lipoxygenase / chemistry
  • Biocatalysis
  • Deuterium
  • Fatty Acids, Unsaturated / chemistry
  • Glycine max
  • Humans
  • Iron / chemistry*
  • Kinetics
  • Linoleic Acid / chemistry
  • Lipoxygenase / chemistry*
  • Lipoxygenase / genetics
  • Manganese / chemistry*
  • Mutation
  • Plant Proteins / chemistry*
  • Recombinant Proteins / chemistry
  • Recombinant Proteins / genetics
  • Temperature
  • Thermodynamics
  • alpha-Linolenic Acid / chemistry

Substances

  • Fatty Acids, Unsaturated
  • Plant Proteins
  • Recombinant Proteins
  • alpha-Linolenic Acid
  • Manganese
  • Linoleic Acid
  • Deuterium
  • Iron
  • lipoxygenase L-1
  • Lipoxygenase
  • ALOX15 protein, human
  • Arachidonate 15-Lipoxygenase