Prader-Willi syndrome with a long-contiguous stretch of homozygosity not covering the critical region

J Child Neurol. 2015 Mar;30(3):371-7. doi: 10.1177/0883073814535492. Epub 2014 May 22.

Abstract

Prader-Willi syndrome is a common and complex disorder affecting multiple systems. Its main manifestations are infantile hypotonia with a poor sucking reflex, a characteristic facial appearance, mild mental retardation, hypogonadism and early-onset obesity. Prader-Willi syndrome is due to the absence of paternally expressed imprinted genes at 15q11.2-13, and 3 main mechanisms are known to be involved in its pathogenesis: paternal microdeletions, maternal uniparental disomy events, and imprinting defects. DNA methylation analysis can detect almost all individuals with Prader-Willi syndrome but is unable to distinguish between the molecular classes of the disease. Thus, additional methods are necessary to identify the molecular classes. Here, we employed chromosomal microarray analysis-single nucleotide polymorphism for diagnosis and detected a long-contiguous stretch of homozygosity on chromosome 15, which is highly predictive of maternal uniparental disomy on chromosome 15. Other methods, including fluorescence in situ hybridization, chromosomal microarray analysis-comparative genomic hybridization, genotyping and family linkage analysis, were performed for further validation. In conclusion, our study highlights the use of long-contiguous stretch of homozygosity detection for the diagnosis of Prader-Willi syndrome.

Keywords: Prader-Willi syndrome; chromosomal microarray analysis–single nucleotide polymorphism array; long-contiguous stretch of homozygosity; uniparental disomy.

Publication types

  • Case Reports

MeSH terms

  • Chromosomes, Human, Pair 15 / genetics
  • Cytogenetics
  • Genetic Linkage
  • Genotype
  • Homozygote
  • Humans
  • Infant
  • Male
  • Microarray Analysis
  • Polymorphism, Single Nucleotide
  • Prader-Willi Syndrome / diagnosis*
  • Prader-Willi Syndrome / genetics*