Association analysis of UGT1A genotype and haplotype with SN-38 glucuronidation in human livers

Pharmacogenomics. 2014 Apr;15(6):785-98. doi: 10.2217/pgs.14.29.

Abstract

Aim: 7-ethyl-10-hydroxycamptothecin (SN-38), the active metabolite of irinotecan, is mainly eliminated hepatically through glucuronidation by UGT1A1 and UGT1A9 enzymes. This study comprehensively investigates the effects of UGT1A1 and UGT1A9 genetic polymorphism on SN-38 glucuronidation activity.

Materials & methods: Genetic polymorphisms and combinational haplotypes of UGT1A1 and UGT1A9, SN-38 glucuronidation activities, and protein levels of UGT1A1 and UGT1A9 were determined using a set of over 45 Chinese livers.

Results: UGT1A1 reduced function variants UGT1A1*6, *28, *60 and *1B exhibited additive effect. The number of UGT1A1 reduced function alleles was associated with decreased SN-38G formation rates and UGT1A protein levels. UGT1A9 I399C>T and UGT1A9*1b, which were highly linked, were associated with increased SN-38 glucuronidation activity and UGT1A protein levels. However, further analysis based on UGT1A9-1A1 haplotypes confirmed that their increased effect was partly due to their close linkage with UGT1A1 reduced function alleles.

Conclusion: UGT1A1 genetic polymorphisms have a more important function in human liver SN-38 glucuronidation activity than UGT1A9. Original submitted 7 November 2013; Revision submitted 30 January 2014.

Keywords: Chinese; SN-38; UGT1A1; UGT1A9; genotype; haplotype; irinotecan.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Alleles
  • Asian People / genetics
  • Camptothecin / analogs & derivatives*
  • Camptothecin / metabolism
  • Genetic Linkage / genetics
  • Genotype
  • Glucuronosyltransferase / genetics*
  • Haplotypes / genetics*
  • Humans
  • Irinotecan
  • Linkage Disequilibrium / genetics
  • Liver / enzymology*
  • Liver / metabolism
  • Polymorphism, Genetic / genetics
  • UDP-Glucuronosyltransferase 1A9

Substances

  • UGT1A9 protein, human
  • Irinotecan
  • UGT1A1 enzyme
  • Glucuronosyltransferase
  • UDP-Glucuronosyltransferase 1A9
  • Camptothecin