Genomic regions repeatedly involved in divergence among plant-specialized pea aphid biotypes

J Evol Biol. 2014 Sep;27(9):2013-20. doi: 10.1111/jeb.12441. Epub 2014 Jun 23.

Abstract

Understanding the genetic bases of biological diversification is a long-standing goal in evolutionary biology. Here, we investigate whether replicated cases of adaptive divergence involve the same genomic regions in the pea aphid, Acyrthosiphon pisum, a large complex of genetically differentiated biotypes, each specialized on different species of legumes. A previous study identified genomic regions putatively involved in host-plant adaptation and/or reproductive isolation by performing a hierarchical genome scan in three biotypes. This led to the identification of 11 F(ST) outliers among 390 polymorphic microsatellite markers. In this study, the outlier status of these 11 loci was assessed in eight biotypes specialized on other host plants. Four of the 11 previously identified outliers showed greater genetic differentiation among these additional biotypes than expected under the null hypothesis of neutral evolution (α < 0.01). Whether these hotspots of genomic divergence result from adaptive events, intrinsic barriers or reduced recombination is discussed.

Keywords: adaptive radiation; ecological speciation; insect-plant interactions; outlier loci; parallel evolution.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Aphids / genetics*
  • Biological Evolution*
  • Ecotype
  • Female
  • Gene Frequency
  • Genetic Drift
  • Genetic Speciation
  • Genome, Insect*
  • Microsatellite Repeats

Associated data

  • Dryad/10.5061/dryad.83FS0