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. 2014 Jul 10;2(4):e00667-14.
doi: 10.1128/genomeA.00667-14.

Draft Genome Sequence of Weissella Oryzae SG25T, Isolated From Fermented Rice Grains

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Free PMC article

Draft Genome Sequence of Weissella Oryzae SG25T, Isolated From Fermented Rice Grains

Yasuhiro Tanizawa et al. Genome Announc. .
Free PMC article

Abstract

Weissella oryzae was originally isolated from fermented rice grains. Here we report the draft genome sequence of the type strain of W. oryzae. This first report on the genomic sequence of this species may help identify the mechanisms underlying bacterial adaptation to the ecological niche of fermented rice grains.

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References

    1. Maclean JL, Dawe DC, Hardy B, Hettel GP, editors. (ed). 2002. Importance of rice, p 1–8 In Rice almanac: source book for the most important economic activity on earth, 3rd ed. CABI Publishing, Wallingford, United Kingdom
    1. Tohno M, Kitahara M, Inoue H, Uegaki R, Irisawa T, Ohkuma M, Tajima K. 2013. Weissella oryzae sp. nov., isolated from fermented rice grain. Int. J. Syst. Evol. Microbiol. 63:1417–1420. 10.1099/ijs.0.043612-0 - DOI - PubMed
    1. Magoč T, Salzberg SL. 2011. FLASH: fast length adjustment of short reads to improve genome assemblies. Bioinformatics 27:2957–2963. 10.1093/bioinformatics/btr507 - DOI - PMC - PubMed
    1. Li H, Durbin R. 2009. Fast and accurate short read alignment with Burrows-Wheeler transform. Bioinformatics 25:1754–1760. 10.1093/bioinformatics/btp324 - DOI - PMC - PubMed
    1. Zerbino DR, Birney E. 2008. Velvet: algorithms for de novo short read assembly using de Bruijn graphs. Genome Res. 18:821–829. 10.1101/gr.074492.107 - DOI - PMC - PubMed

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