MDRL lncRNA regulates the processing of miR-484 primary transcript by targeting miR-361

PLoS Genet. 2014 Jul 24;10(7):e1004467. doi: 10.1371/journal.pgen.1004467. eCollection 2014 Jul.

Abstract

Long noncoding RNAs (lncRNAs) are emerging as new players in gene regulation, but whether lncRNAs operate in the processing of miRNA primary transcript is unclear. Also, whether lncRNAs are involved in the regulation of the mitochondrial network remains to be elucidated. Here, we report that a long noncoding RNA, named mitochondrial dynamic related lncRNA (MDRL), affects the processing of miR-484 primary transcript in nucleus and regulates the mitochondrial network by targeting miR-361 and miR-484. The results showed that miR-361 that predominantly located in nucleus can directly bind to primary transcript of miR-484 (pri-miR-484) and prevent its processing by Drosha into pre-miR-484. miR-361 is able to regulate mitochondrial fission and apoptosis by regulating miR-484 levels. In exploring the underlying molecular mechanism by which miR-361 is regulated, we identified MDRL and demonstrated that it could directly bind to miR-361 and downregulate its expression levels, which promotes the processing of pri-miR-484. MDRL inhibits mitochondrial fission and apoptosis by downregulating miR-361, which in turn relieves inhibition of miR-484 processing by miR-361. Our present study reveals a novel regulating model of mitochondrial fission program which is composed of MDRL, miR-361 and miR-484. Our work not only expands the function of the lncRNA pathway in gene regulation but also establishes a new mechanism for controlling miRNA expression.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Apoptosis / genetics
  • Gene Expression Regulation
  • Gene Regulatory Networks
  • Mice
  • MicroRNAs / genetics*
  • Mitochondrial Dynamics / genetics*
  • Myocytes, Cardiac / metabolism
  • RNA Processing, Post-Transcriptional / genetics
  • RNA, Long Noncoding / genetics*

Substances

  • MIRN361 microRNA, human
  • MIRN484 microRNA, human
  • MicroRNAs
  • RNA, Long Noncoding

Grants and funding

This work was supported by National Natural Science Foundation of China (81270160), Beijing Natural Science Foundation (7142103). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.