Siansivirga jejuensis [corrected] sp. nov., isolated from seawater of Jeju Island in Korea and emendation of the genus Siansivirga

Antonie Van Leeuwenhoek. 2014 Oct;106(4):763-9. doi: 10.1007/s10482-014-0246-9. Epub 2014 Aug 2.

Abstract

A Gram-stain negative, non-flagellated, non-gliding and rod-shaped bacterium, strain JHH-2(T), was isolated from seawater collected in Jeju Island, Korea. The novel isolate was found to grow at 25-30 °C, at pH 6.5-7.0 and in the presence of 1-2% (w/v) NaCl. Phylogenetic analysis based on 16S rRNA gene sequences revealed that strain JHH-2(T) is closely related to Siansivirga zeaxanthinifaciens JCM 17682(T), with 16S rRNA gene sequence similarity of 96.6%. The predominant respiratory quinone was identified as menaquinone-6 and the major cellular fatty acids were detected as iso-C(15:0), C(16:0) and iso-C(17:0) 3-OH. Polar lipid profiling revealed the presence of phosphatidylethanolamine, an unidentified glycolipid, four unidentified aminolipids and two unidentified lipids. The DNA G+C content of the chromosomal DNA of the type strain is 35.6 mol%. On the basis of several distinct phenotypic characteristics and phylogenetic analysis, a new species of the genus Siansivirga, Siansivirga jejuensis [corrected] JHH-2(T) sp. nov. is proposed. The type strain is JHH-2(T) (= KCCM 90230(T) = JCM 19228(T)). [corrected].

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bacterial Typing Techniques
  • Base Composition
  • Cluster Analysis
  • Cytosol / chemistry
  • DNA, Bacterial / chemistry
  • DNA, Bacterial / genetics
  • DNA, Ribosomal / chemistry
  • DNA, Ribosomal / genetics
  • Fatty Acids / analysis
  • Flavobacteriaceae / classification*
  • Flavobacteriaceae / genetics
  • Flavobacteriaceae / isolation & purification*
  • Flavobacteriaceae / physiology
  • Glycolipids / analysis
  • Hydrogen-Ion Concentration
  • Korea
  • Molecular Sequence Data
  • Phospholipids / analysis
  • Phylogeny
  • RNA, Ribosomal, 16S / genetics
  • Seawater / microbiology*
  • Sequence Analysis, DNA
  • Sodium Chloride / metabolism
  • Temperature
  • Vitamin K 2 / analysis

Substances

  • DNA, Bacterial
  • DNA, Ribosomal
  • Fatty Acids
  • Glycolipids
  • Phospholipids
  • RNA, Ribosomal, 16S
  • Vitamin K 2
  • Sodium Chloride

Associated data

  • GENBANK/KF023518