The complete chloroplast genome sequence of Dendrobium officinale

Mitochondrial DNA A DNA Mapp Seq Anal. 2016;27(2):1262-4. doi: 10.3109/19401736.2014.945547. Epub 2014 Aug 8.

Abstract

The complete chloroplast sequence of Dendrobium officinale, an endangered and economically important traditional Chinese medicine, was reported and characterized. The genome size is 152,018 bp, with 37.5% GC content. A pair of inverted repeats (IRs) of 26,284 bp are separated by a large single-copy region (LSC, 84,944 bp) and a small single-copy region (SSC, 14,506 bp). The complete cp DNA contains 83 protein-coding genes, 39 tRNA genes and 8 rRNA genes. Fourteen genes contained one or two introns.

Keywords: Chloroplast genome; Dendrobium officinale; phylogeny; super-barcode.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Base Composition / genetics
  • Base Sequence
  • China
  • Chloroplasts / genetics*
  • Chromosome Mapping
  • DNA, Chloroplast / genetics*
  • Dendrobium / genetics*
  • Gene Order / genetics
  • Genes, Plant / genetics
  • Genome Size / genetics
  • Genome, Chloroplast / genetics*
  • Genome, Plant / genetics*
  • Inverted Repeat Sequences / genetics
  • Medicine, Chinese Traditional
  • Plant Leaves / genetics
  • RNA, Ribosomal / genetics
  • RNA, Transfer / genetics
  • Sequence Analysis, DNA

Substances

  • DNA, Chloroplast
  • RNA, Ribosomal
  • RNA, Transfer