Streptomyces burgazadensis sp. nov., isolated from soil

Int J Syst Evol Microbiol. 2014 Dec;64(Pt 12):4043-4048. doi: 10.1099/ijs.0.065870-0. Epub 2014 Sep 18.

Abstract

A novel actinobacterial strain, designated Z1R7(T), was isolated from a soil sample collected from Burgazada, in the Marmara Sea (Turkey), and the strain identity was determined using a polyphasic taxonomic approach. The organism had chemotaxonomic and morphological properties consistent with its classification in the genus Streptomyces and it formed a distinct phyletic line in the 16S rRNA gene tree, together with the type strains Streptomyces specialis GW41-1564(T) (95.76 %), Streptomyces mayteni YIM 60475(T) (95.64 %), Streptomyces hainanensis YIM 47672(T) (95.53 %), Streptomyces hoynatensis S1412(T) (95.29 %), Streptomyces avicenniae MCCC 1A01535(T) (94.74 %), Streptomyces sedi YIM 65188(T) (94.59 %) and Streptomyces zhaozhouensis NEAU-LZS-5(T) (94.68 %). Chomotaxonomic data revealed that strain Z1R7(T) possesed MK-9 (H8) as the predominant menaquinone, ll-diaminopimelic acid as the diagnostic diamino acid, and galactose, glucose and ribose as whole cell sugars. Diphosphatidylglycerol, phoshphatidylethanolamine and phosphatidylinositol were the predominant polar lipids; iso-C16 : 0, anteiso-C17 : 0 and anteiso-C15 : 0 were the major fatty acids, and the genomic DNA G+C content was 69.4 mol%. On the basis of these genotypic and phenotypic data, it is proposed that isolate Z1R7(T) ( = KCTC 29434(T) = DSM 42126(T)) should be classified in the genus Streptomyces as Streptomyces burgazadensis sp. nov.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bacterial Typing Techniques
  • Base Composition
  • DNA, Bacterial / genetics
  • Diaminopimelic Acid / chemistry
  • Fatty Acids / chemistry
  • Molecular Sequence Data
  • Phylogeny*
  • RNA, Ribosomal, 16S / genetics
  • Sequence Analysis, DNA
  • Soil Microbiology*
  • Streptomyces / classification*
  • Streptomyces / genetics
  • Streptomyces / isolation & purification
  • Turkey
  • Vitamin K 2 / analogs & derivatives
  • Vitamin K 2 / chemistry

Substances

  • DNA, Bacterial
  • Fatty Acids
  • RNA, Ribosomal, 16S
  • Vitamin K 2
  • menaquinone 9
  • Diaminopimelic Acid

Associated data

  • GENBANK/KF793919