Biogeography and phylogenetic position of a warm-stenotherm centric diatom, Skeletonema potamos (C.I. Weber) hasle and its long-term dynamics in the River Danube

Protist. 2014 Sep;165(5):715-29. doi: 10.1016/j.protis.2014.08.001. Epub 2014 Aug 15.

Abstract

Skeletonema potamos is a poorly known freshwater species in the ancestrally and predominantly marine genus Skeletonema. With phylogenetic analysis of two nuclear {partial SSU (18S) and partial LSU (28S) rDNA)} and two chloroplast (rbcL and psbC) genes, we verified its placement within the genus Skeletonema and identified the mostly brackish species, Skeletonema subsalsum, as its closest known relative. Comparisons of SSU and LSU rRNA genes from S. potamos populations from Europe and North America revealed no intraspecific variation. Skeletonema potamos can be a dominant element of the phytoplankton community in various ecosystems, including the River Danube. We tracked phytoplankton composition in the River Danube weekly from 1979 to 2 012, and throughout this period, S. potamos exhibited a strong increase in proportion of total phytoplankton abundance and biomass - an increase that was correlated with increasing water temperature over the same time period. Current records indicate a temperate distribution of S. potamos, but ecological data predict possible expansion of its geographic range and increase in seasonal duration within existing habitats in response to the warming of surface waters.

Keywords: Biogeography; Skeletonema potamos.; ecology; global warming; phylogeny.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Cluster Analysis
  • DNA, Algal / chemistry
  • DNA, Algal / genetics
  • DNA, Chloroplast
  • DNA, Ribosomal / chemistry
  • DNA, Ribosomal / genetics
  • Diatoms / classification*
  • Diatoms / genetics
  • Diatoms / isolation & purification*
  • Europe
  • Molecular Sequence Data
  • Phylogeography*
  • RNA, Ribosomal / genetics
  • RNA, Ribosomal, 18S / genetics
  • Rivers / parasitology*
  • Seasons
  • Sequence Analysis, DNA
  • Temperature

Substances

  • DNA, Algal
  • DNA, Chloroplast
  • DNA, Ribosomal
  • RNA, Ribosomal
  • RNA, Ribosomal, 18S
  • RNA, ribosomal, 26S

Associated data

  • GENBANK/KF621297
  • GENBANK/KF621298
  • GENBANK/KF621299
  • GENBANK/KF621300
  • GENBANK/KF621301
  • GENBANK/KF621302