A split intein T7 RNA polymerase for transcriptional AND-logic

Nucleic Acids Res. 2014 Oct 29;42(19):12322-8. doi: 10.1093/nar/gku884. Epub 2014 Sep 27.

Abstract

Synthetic biology has developed numerous parts for building synthetic gene circuits. However, few parts have been described for prokaryotes to integrate two signals at a promoter in an AND fashion, i.e. the promoter is only activated in the presence of both signals. Here we present a new part for this function: a split intein T7 RNA polymerase. We divide T7 RNA polymerase into two expression domains and fuse each to a split intein. Only when both domains are expressed does the split intein mediate protein trans-splicing, yielding a full-length T7 RNA polymerase that can transcribe genes via a T7 promoter. We demonstrate an AND gate with the new part: the signal-to-background ratio is very high, resulting in an almost digital signal. This has utility for more complex circuits and so we construct a band-pass filter in Escherichia coli. The split intein approach should be widely applicable for engineering artificial gene circuit parts.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • DNA-Directed RNA Polymerases / chemistry*
  • DNA-Directed RNA Polymerases / metabolism
  • Escherichia coli / genetics
  • Inteins*
  • Molecular Sequence Data
  • Trans-Splicing
  • Transcription, Genetic*
  • Viral Proteins / chemistry*
  • Viral Proteins / metabolism

Substances

  • Viral Proteins
  • bacteriophage T7 RNA polymerase
  • DNA-Directed RNA Polymerases

Associated data

  • GENBANK/KM261828
  • GENBANK/KM261829
  • GENBANK/KM261830
  • GENBANK/KM261831
  • GENBANK/KM261832
  • GENBANK/KM261833
  • GENBANK/KM261834
  • GENBANK/KM261835
  • GENBANK/KM261836
  • GENBANK/KM261837