The complete mitochondrial genome of Parus ater (Passeriformes, Paridae)

Mitochondrial DNA A DNA Mapp Seq Anal. 2016 May;27(3):2008-9. doi: 10.3109/19401736.2014.974164. Epub 2014 Oct 20.

Abstract

The complete mitochondrial genome sequence of Coal Tit (Parus ater) consisted 16,783 bp, the genome harbored the same gene order with that of other birds, contained 13 protein-coding genes, 22 tRNAs, 2 rRNAs, and 1 non-coding control region. The all tRNAs can formed typical cloverleaf secondary structures (excluding tRNA(Ser-AGY)). A total of 38 base mismatches appeared, mainly 28 for G-U mismatch, 5 for A-C mismatch, 2 for U-U mismatch. The third loci of codon existed obvious base bias. The control region was between tRNA(Glu) and tRNA(Phe), consisted 1195 bp, no repetitive sequence.

Keywords: Complete mitochondrial genome; Parus ater; Passeriformes.

MeSH terms

  • Animals
  • Base Pairing / genetics
  • Base Sequence
  • Gene Order
  • Genome, Mitochondrial*
  • Passeriformes / genetics*
  • RNA, Transfer / genetics

Substances

  • RNA, Transfer