Fe-S cluster biogenesis in isolated mammalian mitochondria: coordinated use of persulfide sulfur and iron and requirements for GTP, NADH, and ATP

J Biol Chem. 2015 Jan 2;290(1):640-57. doi: 10.1074/jbc.M114.610402. Epub 2014 Nov 14.

Abstract

Iron-sulfur (Fe-S) clusters are essential cofactors, and mitochondria contain several Fe-S proteins, including the [4Fe-4S] protein aconitase and the [2Fe-2S] protein ferredoxin. Fe-S cluster assembly of these proteins occurs within mitochondria. Although considerable data exist for yeast mitochondria, this biosynthetic process has never been directly demonstrated in mammalian mitochondria. Using [(35)S]cysteine as the source of sulfur, here we show that mitochondria isolated from Cath.A-derived cells, a murine neuronal cell line, can synthesize and insert new Fe-(35)S clusters into aconitase and ferredoxins. The process requires GTP, NADH, ATP, and iron, and hydrolysis of both GTP and ATP is necessary. Importantly, we have identified the (35)S-labeled persulfide on the NFS1 cysteine desulfurase as a genuine intermediate en route to Fe-S cluster synthesis. In physiological settings, the persulfide sulfur is released from NFS1 and transferred to a scaffold protein, where it combines with iron to form an Fe-S cluster intermediate. We found that the release of persulfide sulfur from NFS1 requires iron, showing that the use of iron and sulfur for the synthesis of Fe-S cluster intermediates is a highly coordinated process. The release of persulfide sulfur also requires GTP and NADH, probably mediated by a GTPase and a reductase, respectively. ATP, a cofactor for a multifunctional Hsp70 chaperone, is not required at this step. The experimental system described here may help to define the biochemical basis of diseases that are associated with impaired Fe-S cluster biogenesis in mitochondria, such as Friedreich ataxia.

Keywords: Friedreich Ataxia; Iron; Iron Metabolism; Iron-Sulfur Protein; Metal Homeostasis; Mitochondria; Mitochondrial Aconitase; Mitochondrial Metabolism; Sulfur; Yeast.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Aconitate Hydratase / chemistry
  • Aconitate Hydratase / genetics
  • Aconitate Hydratase / metabolism
  • Adenosine Triphosphate / chemistry*
  • Adenosine Triphosphate / metabolism
  • Animals
  • Carbon-Sulfur Lyases / genetics
  • Carbon-Sulfur Lyases / metabolism
  • Cell Line
  • Cysteine / chemistry
  • Cysteine / metabolism
  • Escherichia coli / genetics
  • Escherichia coli / metabolism
  • Ferredoxins / chemistry
  • Ferredoxins / genetics
  • Ferredoxins / metabolism
  • Gene Expression
  • Guanosine Triphosphate / chemistry*
  • Guanosine Triphosphate / metabolism
  • HSP70 Heat-Shock Proteins / genetics
  • HSP70 Heat-Shock Proteins / metabolism
  • HeLa Cells
  • Humans
  • Iron / chemistry*
  • Iron / metabolism
  • Mice
  • Mitochondria / chemistry
  • Mitochondria / metabolism*
  • Mitochondrial Proteins / chemistry*
  • Mitochondrial Proteins / genetics
  • Mitochondrial Proteins / metabolism
  • NAD / chemistry*
  • NAD / metabolism
  • Neurons / cytology
  • Neurons / metabolism
  • Recombinant Proteins / genetics
  • Recombinant Proteins / metabolism
  • Sulfides / chemistry*
  • Sulfides / metabolism
  • Sulfur Radioisotopes

Substances

  • Ferredoxins
  • HSP70 Heat-Shock Proteins
  • Mitochondrial Proteins
  • Recombinant Proteins
  • Sulfides
  • Sulfur Radioisotopes
  • persulfides
  • NAD
  • Guanosine Triphosphate
  • Adenosine Triphosphate
  • Iron
  • Aconitate Hydratase
  • Carbon-Sulfur Lyases
  • Nfs1 protein, mouse
  • Cysteine