Fetal iron deficiency induces chromatin remodeling at the Bdnf locus in adult rat hippocampus

Am J Physiol Regul Integr Comp Physiol. 2015 Feb 15;308(4):R276-82. doi: 10.1152/ajpregu.00429.2014. Epub 2014 Dec 17.

Abstract

Fetal and subsequent early postnatal iron deficiency causes persistent impairments in cognitive and affective behaviors despite prompt postnatal iron repletion. The long-term cognitive impacts are accompanied by persistent downregulation of brain-derived neurotrophic factor (BDNF), a factor critical for hippocampal plasticity across the life span. This study determined whether early-life iron deficiency epigenetically modifies the Bdnf locus and whether dietary choline supplementation during late gestation reverses these modifications. DNA methylation and histone modifications were assessed at the Bdnf-IV promoter in the hippocampus of rats [at postnatal day (PND) 65] that were iron-deficient (ID) during the fetal-neonatal period. Iron deficiency was induced in rat pups by providing pregnant and nursing dams an ID diet (4 mg/kg Fe) from gestational day (G) 2 through PND7, after which iron deficiency was treated with an iron-sufficient (IS) diet (200 mg/kg Fe). This paradigm resulted in about 60% hippocampal iron loss on PND15 with complete recovery by PND65. For choline supplementation, pregnant rat dams were given dietary choline (5 g/kg) from G11 through G18. DNA methylation was determined by quantitative sequencing of bisulfite-treated DNA, revealing a small alteration at the Bdnf-IV promoter. Chromatin immunoprecipitation analysis showed increased HDAC1 binding accompanied by reduced binding of RNA polymerase II and USF1 at the Bdnf-IV promoter in formerly ID rats. These changes were correlated with altered histone methylations. Prenatal choline supplementation reverses these epigenetic modifications. Collectively, the findings identify epigenetic modifications as a potential mechanism to explicate the long-term repression of Bdnf following fetal and early postnatal iron deficiency.

Keywords: DNA methylation; epigenetics; hippocampus; histone methylation; iron deficiency.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Age Factors
  • Animals
  • Binding Sites
  • Brain-Derived Neurotrophic Factor / genetics*
  • Brain-Derived Neurotrophic Factor / metabolism
  • Choline / administration & dosage
  • Chromatin Assembly and Disassembly* / drug effects
  • DNA Methylation* / drug effects
  • Disease Models, Animal
  • Down-Regulation
  • Epigenesis, Genetic* / drug effects
  • Female
  • Gestational Age
  • Hippocampus / drug effects
  • Hippocampus / metabolism*
  • Histone Deacetylase 1 / metabolism
  • Histones / metabolism
  • Iron / blood
  • Iron Deficiencies*
  • Iron Metabolism Disorders / blood
  • Iron Metabolism Disorders / complications
  • Iron Metabolism Disorders / drug therapy
  • Iron Metabolism Disorders / genetics*
  • Methylation
  • Pregnancy
  • Prenatal Exposure Delayed Effects*
  • Promoter Regions, Genetic
  • RNA Polymerase II / metabolism
  • Rats, Sprague-Dawley
  • Time Factors
  • Upstream Stimulatory Factors / metabolism

Substances

  • Brain-Derived Neurotrophic Factor
  • Histones
  • Upstream Stimulatory Factors
  • Usf1 protein, rat
  • Iron
  • RNA Polymerase II
  • Hdac1 protein, rat
  • Histone Deacetylase 1
  • Choline