Hannaella siamensis sp. nov. and Hannaella phetchabunensis sp. nov., two new anamorphic basidiomycetous yeast species isolated from plants

Int J Syst Evol Microbiol. 2015 Apr;65(Pt 4):1297-1303. doi: 10.1099/ijs.0.000101. Epub 2015 Feb 2.

Abstract

Eight strains, representing two novel anamorphic yeast species, consisted of five strains isolated from the external surfaces of rice leaves (DMKU-RP72(T), DMKU-RP109, DMKU-RP119, YE-124 and YE-156) and one from a corn leaf (DMKU-CP430(T))4 collected in Thailand, and one strain isolated from each of a composite flower (11-1114) and a fallen dead leaf (12-301); the latter two were collected in Belize. On the basis of sequence analysis of the D1/D2 region of the large subunit rRNA gene and the internal transcribed spacer (ITS) region, they were suggested to be two novel species of the genus Hannaella. Seven strains (DMKU-RP72(T), DMKU-RP109, DMKU-RP119, YE-124, YE-156, 11-1114 and 12-301) differed from each other by 0-3 nt substitutions in the D1/D2 region and by 0-1 nt substitutions in the ITS region. In terms of pairwise sequence similarities of the D1/D2 region these seven strains were closest to Hannaella zeae, but with 1.2-1.7% (7-9) nucleotide substitutions. The sequences of the ITS region of these seven strains differed from H. zeae by 3.7-3.9% (16-17) nucleotide substitutions. Therefore, they were assigned to a single novel species and the name Hannaella siamensis sp. nov. has been proposed. The type strain is DMKU-RP72(T) ( = BCC 69493(T) = NBRC 110425(T) = CBS 13533(T)). Strain DMKU-CP430(T) represents the second novel species and was also most closely related to H. zeae, but with 1.0% (6) nucleotide substitutions in the D1/D2 region and 3.2% (14) nucleotide substitutions in the ITS region. It was assigned to the proposed novel species, Hannaella phetchabunensis sp. nov. (type strain DMKU-CP430(T) = BCC 69492(T) = NBRC 110424(T) = CBS 13386(T)).

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Basidiomycota / classification*
  • Basidiomycota / genetics
  • Basidiomycota / isolation & purification
  • DNA, Fungal / genetics
  • DNA, Ribosomal Spacer / genetics
  • Molecular Sequence Data
  • Mycological Typing Techniques
  • Oryza / microbiology*
  • Phylogeny*
  • Plant Leaves / microbiology
  • RNA, Ribosomal / genetics
  • Sequence Analysis, DNA
  • Thailand
  • Zea mays / microbiology*

Substances

  • DNA, Fungal
  • DNA, Ribosomal Spacer
  • RNA, Ribosomal

Associated data

  • GENBANK/AB922844
  • GENBANK/AB922849
  • GENBANK/AB922850
  • GENBANK/AB922855