The complete chloroplast genome sequence of Safflower (Carthamus tinctorius L.)

Mitochondrial DNA A DNA Mapp Seq Anal. 2016 Sep;27(5):3351-3. doi: 10.3109/19401736.2015.1018217. Epub 2015 Mar 5.

Abstract

Safflower (Carthamus tinctorius L.) is a traditional medical plants of Asia. In this study, the complete chloroplast genome of safflower was presented. The total genome size was 153,675 bp in length, containing a pair of inverted repeats (IRs) of 25,407 bp, separated by large single copy (LSC) and small single copy (SSC) of 83,606 bp and 19,156 bp, respectively. Overall GC content of the genome was 37.4%. The chloroplast genome harbored 127 annotated genes, including 89 protein coding genes, 30 tRNA genes and 8 rRNA genes. A total of 7 of these genes were duplicated in the inverted repeat regions. Twelve genes contained one intron.

Keywords: Chloroplast; genome sequence; medicinal plant; safflower.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Base Composition
  • Carthamus tinctorius / classification
  • Carthamus tinctorius / genetics*
  • Codon
  • Computational Biology
  • Gene Order
  • Genes, Chloroplast
  • Genome Size
  • Genome, Chloroplast*
  • Open Reading Frames
  • Regulatory Sequences, Nucleic Acid
  • Sequence Analysis, DNA
  • Whole Genome Sequencing

Substances

  • Codon