Sequencing of the complete genome of an araphid pennate diatom Synedra acus subsp. radians from Lake Baikal

doi:10.1134/S1607672915020064

. 2015:461:84-8.

doi: 10.1134/S1607672915020064. Epub 2015 May 5.

Sequencing of the complete genome of an araphid pennate diatom Synedra acus subsp. radians from Lake Baikal

Y P Galachyants¹, Yu R Zakharova, D P Petrova, A A Morozov, I A Sidorov, A M Marchenkov, M D Logacheva, M L Markelov, K V Khabudaev, Ye V Likhoshway, M A Grachev

Affiliations

PMID: 25937221
DOI: 10.1134/S1607672915020064

Sequencing of the complete genome of an araphid pennate diatom Synedra acus subsp. radians from Lake Baikal

Y P Galachyants et al. Dokl Biochem Biophys. 2015.

. 2015:461:84-8.

doi: 10.1134/S1607672915020064. Epub 2015 May 5.

Authors

Y P Galachyants¹, Yu R Zakharova, D P Petrova, A A Morozov, I A Sidorov, A M Marchenkov, M D Logacheva, M L Markelov, K V Khabudaev, Ye V Likhoshway, M A Grachev

Affiliation

¹ Limnological Institute, Siberian Branch of the Russian Academy of Sciences, Irkutsk, Russia, yuri.galachyants@lin.irk.ru.

PMID: 25937221
DOI: 10.1134/S1607672915020064

Abstract

High-throughput method of sequencing was applied to determine the complete nucleotide sequence of an araphid pennate diatom Synedra acus subsp. radians from Lake Baikal (East Siberia). The assembled genome has a total length of 98 Mbp, the mean coverage is 33x. Structure-functional annotation of the genome was performed.

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References

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[1] J Proteome Res. 2014 Feb 7;13(2):720-34 - PubMed

[2] J Proteome Res. 2014 Feb 7;13(2):720-34 - PubMed

[3] Nucleic Acids Res. 2008 Jun;36(10):3420-35 - PubMed

[4] Nucleic Acids Res. 2008 Jun;36(10):3420-35 - PubMed

[5] Genome Res. 2003 Sep;13(9):2178-89 - PubMed

[6] Genome Res. 2003 Sep;13(9):2178-89 - PubMed

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[9] Bioinformatics. 2014 May 1;30(9):1236-40 - PubMed

[10] Bioinformatics. 2014 May 1;30(9):1236-40 - PubMed

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Sequencing of the complete genome of an araphid pennate diatom Synedra acus subsp. radians from Lake Baikal

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Sequencing of the complete genome of an araphid pennate diatom Synedra acus subsp. radians from Lake Baikal

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