[Identification of 3 novel HLA-A alleles A*24:224, A*24:225 and A*24:257 by sequence-based typing]

Zhonghua Yi Xue Yi Chuan Xue Za Zhi. 2015 Jun;32(3):415-7. doi: 10.3760/cma.j.issn.1003-9406.2015.03.025.
[Article in Chinese]

Abstract

Objective: To verify 3 novel HLA-A alleles A*24:224, A*24:225 and A*24:257 identified in Chinese Han individuals.

Methods: No full matched results were obtained at HLA-A locus in HLA typing for China Marrow Donor Program (CMDP) using bi-allelic Sequence-Based Typing (SBT). The novel HLA alleles were identified with allele-specific amplification SBT.

Results: All of the three probands had a novel nucleotide sequence at HLA-A locus. All of the 3 new sequences are most close to HLA-A*24:02:01:01 except for 1 or 2 nucleotide substitution in exon 2, which resulted in different changes in corresponding codons and encoded amino acids.

Conclusion: Three novel HLA-A alleles were confirmed and officially named as HLA-A*24:224, HLA-A*24:225 and HLA-A*24:257 under the GenBank accession numbers JQ899198, JQ924283 and HG003642 by the WHO Nomenclature Committee for Factors of the HLA System in November 2012 and November 2013, respectively.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Alleles
  • Asian People / ethnology
  • Asian People / genetics*
  • Base Sequence
  • China / ethnology
  • Genetics, Population
  • HLA-A24 Antigen / genetics*
  • Histocompatibility Testing
  • Humans
  • Molecular Sequence Data
  • Polymorphism, Single Nucleotide
  • Sequence Analysis, DNA

Substances

  • HLA-A24 Antigen

Associated data

  • GENBANK/HG003642
  • GENBANK/JQ899198
  • GENBANK/JQ924283