Visualization of RNA-Quadruplexes in Live Cells

J Am Chem Soc. 2015 Jul 8;137(26):8521-5. doi: 10.1021/jacs.5b03413. Epub 2015 Jun 23.

Abstract

Visualization of DNA and RNA quadruplex formation in human cells was demonstrated recently with different quadruplex-specific antibodies. Despite the significant interest in these immunodetection approaches, dynamic detection of quadruplex in live cells remains elusive. Here, we report on NaphthoTASQ (N-TASQ), a next-generation quadruplex ligand that acts as a multiphoton turn-on fluorescent probe. Single-step incubation of human and mouse cells with N-TASQ enables the direct detection of RNA-quadruplexes in untreated cells (no fixation, permeabilization or mounting steps), thus offering a unique, unbiased visualization of quadruplexes in live cells.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Biomimetics
  • Cations
  • Cell Line, Tumor
  • Chelating Agents / chemistry
  • DNA / genetics*
  • Fluorescence Resonance Energy Transfer
  • Fluorescent Dyes / chemistry*
  • G-Quadruplexes*
  • Humans
  • Ligands
  • MCF-7 Cells
  • Melanoma, Experimental
  • Mice
  • Microscopy, Fluorescence / methods*
  • Photons
  • RNA / chemistry
  • RNA / genetics*
  • Static Electricity

Substances

  • Cations
  • Chelating Agents
  • Fluorescent Dyes
  • Ligands
  • RNA
  • DNA