Functional interactions among filamentous Epsilonproteobacteria and Bacteroidetes in a deep-sea hydrothermal vent biofilm

Environ Microbiol. 2015 Oct;17(10):4063-77. doi: 10.1111/1462-2920.12970. Epub 2015 Aug 17.


Little is known about how lithoautotrophic primary production is connected to microbial organotrophic consumption in hydrothermal systems. Using a multifaceted approach, we analysed the structure and metabolic capabilities within a biofilm growing on the surface of a black smoker chimney in the Loki's Castle vent field. Imaging revealed the presence of rod-shaped Bacteroidetes growing as ectobionts on long, sheathed microbial filaments (> 100 μm) affiliated with the Sulfurovum genus within Epsilonproteobacteria. The filaments were composed of a thick (> 200 nm) stable polysaccharide, representing a substantial fraction of organic carbon produced by primary production. An integrated -omics approach enabled us to assess the metabolic potential and in situ metabolism of individual taxonomic and morphological groups identified by imaging. Specifically, we provide evidence that organotrophic Bacteroidetes attach to and glide along the surface of Sulfurovum filaments utilizing organic polymers produced by the lithoautotrophic Sulfurovum. Furthermore, in situ expression of acetyl-CoA synthetase by Sulfurovum suggested the ability to assimilate acetate, indicating recycling of organic matter in the biofilm. This study expands our understanding of the lifestyles of Epsilonproteobacteria in hydrothermal vents, their metabolic properties and co-operative interactions in deep-sea hydrothermal vent food webs.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Acetates / metabolism
  • Acetyl Coenzyme A / biosynthesis
  • Bacteroidetes / genetics
  • Bacteroidetes / physiology*
  • Biofilms*
  • Coenzyme A Ligases / biosynthesis
  • Coenzyme A Ligases / metabolism*
  • Epsilonproteobacteria / genetics
  • Epsilonproteobacteria / physiology*
  • Hydrothermal Vents / microbiology*
  • Microbial Interactions*
  • Phylogeny
  • RNA, Ribosomal, 16S / genetics


  • Acetates
  • RNA, Ribosomal, 16S
  • Acetyl Coenzyme A
  • Coenzyme A Ligases
  • acetate-CoA ligase (ADP-forming)